MotifZN652.H12CORE.0.PS.A
Gene (human)ZNF652
(GeneCards)
Gene synonyms (human)KIAA0924
Gene (mouse)Znf652
Gene synonyms (mouse)Kiaa0924, Zfp652
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
A
Motif length11
ConsensusbvRRGGGTTAA
GC content36.77%
Information content (bits; total / per base)13.869 / 1.261
Data sourcesChIP-Seq + HT-SELEX
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.958 0.966 0.931 0.946 0.951 0.957 4.805 4.916 604.495 629.509

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 1 experiments median 0.593 0.6 0.543 0.551 0.522 0.53
best 0.593 0.6 0.543 0.551 0.522 0.53
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF652-like {2.3.3.29} (TFClass)
TFClass IDTFClass: 2.3.3.29.1
HGNCHGNC:29147
MGIMGI:2442221
EntrezGene (human)GeneID:22834
(SSTAR profile)
EntrezGene (mouse)GeneID:268469
(SSTAR profile)
UniProt ID (human)ZN652_HUMAN
UniProt ID (mouse)ZN652_MOUSE
UniProt AC (human)Q9Y2D9
(TFClass)
UniProt AC (mouse)Q5DU09
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 0
PCM
ACGT
0171.0239.0433.0257.0
02604.0145.0137.0114.0
03778.063.0111.048.0
04697.021.0235.047.0
0548.036.0836.080.0
06245.03.0734.018.0
072.02.0995.01.0
081.01.00.0998.0
094.06.010.0980.0
10986.06.04.04.0
11967.020.08.05.0
PFM
ACGT
010.0710.2390.4330.257
020.6040.1450.1370.114
030.7780.0630.1110.048
040.6970.0210.2350.047
050.0480.0360.8360.08
060.2450.0030.7340.018
070.0020.0020.9950.001
080.0010.0010.00.998
090.0040.0060.010.98
100.9860.0060.0040.004
110.9670.020.0080.005
PWM
ACGT
01-1.242-0.0450.5460.027
020.878-0.54-0.596-0.777
031.131-1.358-0.803-1.622
041.021-2.405-0.061-1.642
05-1.622-1.8981.202-1.125
06-0.02-3.9751.073-2.546
07-4.213-4.2131.376-4.525
08-4.525-4.525-4.9821.379
09-3.783-3.484-3.0661.361
101.367-3.484-3.783-3.783
111.348-2.45-3.253-3.622
Standard thresholds
P-value Threshold
0.001 3.128315
0.0005 4.35765
0.0001 6.91977