MotifZN649.H12INVITRO.0.P.D
Gene (human)ZNF649
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length25
ConsensusGATATAATCTCCTGGTGTGCCRTTT
GC content42.38%
Information content (bits; total / per base)45.24 / 1.81
Data sourcesChIP-Seq
Aligned words975

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.982 0.987 0.985 0.989 0.981 0.986 26.738 26.901 707.367 763.824
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF350-like {2.3.3.30} (TFClass)
TFClass IDTFClass: 2.3.3.30.3
HGNCHGNC:25741
MGI
EntrezGene (human)GeneID:65251
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN649_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9BS31
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
012.03.0967.03.0
02975.00.00.00.0
030.00.00.0975.0
04974.00.01.00.0
050.06.00.0969.0
06974.01.00.00.0
07975.00.00.00.0
081.02.01.0971.0
0910.0947.09.09.0
101.03.00.0971.0
111.0968.02.04.0
124.0955.011.05.0
131.05.00.0969.0
147.01.0962.05.0
1512.07.0946.010.0
161.05.03.0966.0
171.01.0971.02.0
186.0162.04.0803.0
1925.06.0936.08.0
202.0956.06.011.0
2111.0797.07.0160.0
22324.010.0630.011.0
232.015.02.0956.0
246.04.08.0957.0
252.04.05.0964.0
PFM
ACGT
010.0020.0030.9920.003
021.00.00.00.0
030.00.00.01.0
040.9990.00.0010.0
050.00.0060.00.994
060.9990.0010.00.0
071.00.00.00.0
080.0010.0020.0010.996
090.010.9710.0090.009
100.0010.0030.00.996
110.0010.9930.0020.004
120.0040.9790.0110.005
130.0010.0050.00.994
140.0070.0010.9870.005
150.0120.0070.970.01
160.0010.0050.0030.991
170.0010.0010.9960.002
180.0060.1660.0040.824
190.0260.0060.960.008
200.0020.9810.0060.011
210.0110.8170.0070.164
220.3320.010.6460.011
230.0020.0150.0020.981
240.0060.0040.0080.982
250.0020.0040.0050.989
PWM
ACGT
01-4.189-3.9511.373-3.951
021.381-4.96-4.96-4.96
03-4.96-4.96-4.961.381
041.38-4.96-4.502-4.96
05-4.96-3.459-4.961.375
061.38-4.502-4.96-4.96
071.381-4.96-4.96-4.96
08-4.502-4.189-4.5021.377
09-3.0421.352-3.131-3.131
10-4.502-3.951-4.961.377
11-4.5021.374-4.189-3.759
12-3.7591.36-2.96-3.598
13-4.502-3.598-4.961.375
14-3.337-4.5021.368-3.598
15-2.884-3.3371.351-3.042
16-4.502-3.598-3.9511.372
17-4.502-4.5021.377-4.189
18-3.459-0.405-3.7591.187
19-2.218-3.4591.34-3.229
20-4.1891.361-3.459-2.96
21-2.961.18-3.337-0.417
220.283-3.0420.945-2.96
23-4.189-2.687-4.1891.361
24-3.459-3.759-3.2291.362
25-4.189-3.759-3.5981.37
Standard thresholds
P-value Threshold
0.001 -25.05094
0.0005 -22.41309
0.0001 -16.74299