MotifZN627.H12CORE.0.P.C
Gene (human)ZNF627
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusGTAGGTCTCAACAGTGGRCTTAA
GC content45.47%
Information content (bits; total / per base)35.12 / 1.527
Data sourcesChIP-Seq
Aligned words931

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.968 0.976 0.97 0.977 0.965 0.975 18.565 18.842 576.511 663.046
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF763-like {2.3.3.33} (TFClass)
TFClass IDTFClass: 2.3.3.33.7
HGNCHGNC:30570
MGI
EntrezGene (human)GeneID:199692
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN627_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q7L945
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0135.05.0887.04.0
0214.064.017.0836.0
03862.01.059.09.0
0418.01.0908.04.0
05107.07.0778.039.0
060.024.00.0907.0
072.0924.00.05.0
082.09.01.0919.0
093.0875.08.045.0
10909.03.015.04.0
11925.02.04.00.0
1237.0784.025.085.0
13863.014.023.031.0
14117.031.0766.017.0
1519.054.021.0837.0
16150.07.0751.023.0
1750.014.0842.025.0
1898.056.0740.037.0
1925.0850.014.042.0
2021.042.03.0865.0
2127.018.032.0854.0
22858.021.023.029.0
23914.08.06.03.0
PFM
ACGT
010.0380.0050.9530.004
020.0150.0690.0180.898
030.9260.0010.0630.01
040.0190.0010.9750.004
050.1150.0080.8360.042
060.00.0260.00.974
070.0020.9920.00.005
080.0020.010.0010.987
090.0030.940.0090.048
100.9760.0030.0160.004
110.9940.0020.0040.0
120.040.8420.0270.091
130.9270.0150.0250.033
140.1260.0330.8230.018
150.020.0580.0230.899
160.1610.0080.8070.025
170.0540.0150.9040.027
180.1050.060.7950.04
190.0270.9130.0150.045
200.0230.0450.0030.929
210.0290.0190.0340.917
220.9220.0230.0250.031
230.9820.0090.0060.003
PWM
ACGT
01-1.854-3.5541.332-3.715
02-2.703-1.272-2.5281.273
031.304-4.461-1.351-3.086
04-2.476-4.4611.356-3.715
05-0.769-3.2931.202-1.751
06-4.921-2.21-4.9211.355
07-4.1471.373-4.921-3.554
08-4.147-3.086-4.4611.368
09-3.9081.319-3.184-1.613
101.357-3.908-2.641-3.715
111.374-4.147-3.715-4.921
12-1.8011.209-2.172-0.995
131.305-2.703-2.25-1.97
14-0.681-1.971.186-2.528
15-2.427-1.437-2.3351.275
16-0.435-3.2931.166-2.25
17-1.512-2.7031.281-2.172
18-0.855-1.4021.152-1.801
19-2.1721.29-2.703-1.68
20-2.335-1.68-3.9081.307
21-2.1-2.476-1.941.295
221.299-2.335-2.25-2.033
231.362-3.184-3.415-3.908
Standard thresholds
P-value Threshold
0.001 -9.66584
0.0005 -7.71424
0.0001 -3.51694