MotifZN613.H12INVITRO.0.P.D
Gene (human)ZNF613
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length25
ConsensusbChbhdKYTTTTWWWbYKbbhddbd
GC content31.48%
Information content (bits; total / per base)14.174 / 0.567
Data sourcesChIP-Seq
Aligned words363

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.669 0.679 0.514 0.534 0.753 0.76 4.152 4.289 15.58 21.638
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF350-like {2.3.3.30} (TFClass)
TFClass IDTFClass: 2.3.3.30.4
HGNCHGNC:25827
MGI
EntrezGene (human)GeneID:79898
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN613_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q6PF04
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0135.0101.0165.062.0
025.0297.030.031.0
0389.0103.08.0163.0
0458.061.0109.0135.0
05108.069.039.0147.0
0693.033.036.0201.0
0736.032.078.0217.0
0827.086.021.0229.0
095.02.020.0336.0
103.037.019.0304.0
1112.012.02.0337.0
125.012.015.0331.0
1353.022.030.0258.0
1439.019.021.0284.0
15124.030.024.0185.0
1642.063.066.0192.0
1723.080.029.0231.0
1845.030.063.0225.0
1931.033.0139.0160.0
2038.0115.079.0131.0
2165.0124.09.0165.0
2299.037.046.0181.0
2346.021.0141.0155.0
2445.069.050.0199.0
2584.035.095.0149.0
PFM
ACGT
010.0960.2780.4550.171
020.0140.8180.0830.085
030.2450.2840.0220.449
040.160.1680.30.372
050.2980.190.1070.405
060.2560.0910.0990.554
070.0990.0880.2150.598
080.0740.2370.0580.631
090.0140.0060.0550.926
100.0080.1020.0520.837
110.0330.0330.0060.928
120.0140.0330.0410.912
130.1460.0610.0830.711
140.1070.0520.0580.782
150.3420.0830.0660.51
160.1160.1740.1820.529
170.0630.220.080.636
180.1240.0830.1740.62
190.0850.0910.3830.441
200.1050.3170.2180.361
210.1790.3420.0250.455
220.2730.1020.1270.499
230.1270.0580.3880.427
240.1240.190.1380.548
250.2310.0960.2620.41
PWM
ACGT
01-0.9280.1050.591-0.374
02-2.6561.174-1.075-1.044
03-0.0190.125-2.2760.579
04-0.439-0.3890.1810.392
050.171-0.269-0.8240.476
060.024-0.984-0.9010.786
07-0.901-1.013-0.1490.862
08-1.175-0.053-1.4120.916
09-2.656-3.279-1.4571.297
10-3.026-0.874-1.5051.198
11-1.923-1.923-3.2791.3
12-2.656-1.923-1.7221.282
13-0.526-1.368-1.0751.034
14-0.824-1.505-1.4121.13
150.308-1.075-1.2870.704
16-0.752-0.358-0.3120.741
17-1.327-0.124-1.1070.925
18-0.685-1.075-0.3580.898
19-1.044-0.9840.4210.56
20-0.8490.233-0.1360.362
21-0.3270.308-2.1750.591
220.086-0.874-0.6640.682
23-0.664-1.4120.4350.529
24-0.685-0.269-0.5830.776
25-0.076-0.9280.0450.49
Standard thresholds
P-value Threshold
0.001 3.77346
0.0005 4.74391
0.0001 6.79796