MotifZN611.H12INVIVO.1.P.C
Gene (human)ZNF611
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
C
Motif length25
ConsensusTCTGGGAWGTGAGGAGCGCCTCTGC
GC content63.52%
Information content (bits; total / per base)42.431 / 1.697
Data sourcesChIP-Seq
Aligned words806

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.816 0.829 0.676 0.719 0.88 0.919 18.176 19.628 59.877 65.854
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF813-like {2.3.3.72} (TFClass)
TFClass IDTFClass: 2.3.3.72.3
HGNCHGNC:28766
MGI
EntrezGene (human)GeneID:81856
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN611_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8N823
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
019.012.08.0777.0
025.0793.05.03.0
032.08.04.0792.0
0414.08.0778.06.0
0527.06.0766.07.0
069.09.0785.03.0
07788.04.010.04.0
08293.03.0151.0359.0
0919.012.0774.01.0
107.09.010.0780.0
1110.03.0791.02.0
12737.03.055.011.0
138.02.0795.01.0
148.04.0793.01.0
15793.03.04.06.0
163.02.0798.03.0
1713.0699.04.090.0
1851.016.0735.04.0
192.0709.03.092.0
200.0800.03.03.0
214.010.02.0790.0
221.0791.08.06.0
232.021.05.0778.0
243.03.0793.07.0
255.0786.04.011.0
PFM
ACGT
010.0110.0150.010.964
020.0060.9840.0060.004
030.0020.010.0050.983
040.0170.010.9650.007
050.0330.0070.950.009
060.0110.0110.9740.004
070.9780.0050.0120.005
080.3640.0040.1870.445
090.0240.0150.960.001
100.0090.0110.0120.968
110.0120.0040.9810.002
120.9140.0040.0680.014
130.010.0020.9860.001
140.010.0050.9840.001
150.9840.0040.0050.007
160.0040.0020.990.004
170.0160.8670.0050.112
180.0630.020.9120.005
190.0020.880.0040.114
200.00.9930.0040.004
210.0050.0120.0020.98
220.0010.9810.010.007
230.0020.0260.0060.965
240.0040.0040.9840.009
250.0060.9750.0050.014
PWM
ACGT
01-2.946-2.699-3.0451.344
02-3.4161.364-3.416-3.772
03-4.013-3.045-3.5781.363
04-2.562-3.0451.345-3.276
05-1.958-3.2761.329-3.154
06-2.946-2.9461.354-3.772
071.358-3.578-2.857-3.578
080.372-3.772-0.2860.574
09-2.285-2.6991.34-4.331
10-3.154-2.946-2.8571.347
11-2.857-3.7721.361-4.013
121.291-3.772-1.277-2.775
13-3.045-4.0131.366-4.331
14-3.045-3.5781.364-4.331
151.364-3.772-3.578-3.276
16-3.772-4.0131.37-3.772
17-2.6281.238-3.578-0.796
18-1.35-2.4421.288-3.578
19-4.0131.252-3.772-0.774
20-4.7991.373-3.772-3.772
21-3.578-2.857-4.0131.36
22-4.3311.361-3.045-3.276
23-4.013-2.193-3.4161.345
24-3.772-3.7721.364-3.154
25-3.4161.355-3.578-2.775
Standard thresholds
P-value Threshold
0.001 -17.47834
0.0005 -15.20289
0.0001 -10.30954