MotifZN611.H12INVIVO.0.P.C
Gene (human)ZNF611
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusvbGGAGMGCCYvhRvvSvSvbSb
GC content68.19%
Information content (bits; total / per base)15.961 / 0.694
Data sourcesChIP-Seq
Aligned words291

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.874 0.9 0.721 0.782 0.956 0.974 11.882 12.577 163.367 178.721
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF813-like {2.3.3.72} (TFClass)
TFClass IDTFClass: 2.3.3.72.3
HGNCHGNC:28766
MGI
EntrezGene (human)GeneID:81856
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN611_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8N823
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0144.066.0152.029.0
0233.073.087.098.0
0340.09.0237.05.0
0418.04.0268.01.0
05265.06.012.08.0
063.04.0282.02.0
07114.0146.09.022.0
0811.01.0273.06.0
0910.0265.011.05.0
106.0273.00.012.0
115.094.035.0157.0
12119.0100.063.09.0
1348.067.040.0136.0
1494.035.0154.08.0
15117.0105.054.015.0
16124.0115.032.020.0
1725.0168.067.031.0
1854.037.0167.033.0
1925.097.0161.08.0
2091.0141.032.027.0
2135.0118.047.091.0
2226.059.0181.025.0
2323.0138.079.051.0
PFM
ACGT
010.1510.2270.5220.1
020.1130.2510.2990.337
030.1370.0310.8140.017
040.0620.0140.9210.003
050.9110.0210.0410.027
060.010.0140.9690.007
070.3920.5020.0310.076
080.0380.0030.9380.021
090.0340.9110.0380.017
100.0210.9380.00.041
110.0170.3230.120.54
120.4090.3440.2160.031
130.1650.230.1370.467
140.3230.120.5290.027
150.4020.3610.1860.052
160.4260.3950.110.069
170.0860.5770.230.107
180.1860.1270.5740.113
190.0860.3330.5530.027
200.3130.4850.110.093
210.120.4050.1620.313
220.0890.2030.6220.086
230.0790.4740.2710.175
PWM
ACGT
01-0.49-0.0950.727-0.891
02-0.7680.0030.1760.293
03-0.583-1.9631.168-2.447
04-1.34-2.6171.29-3.423
051.279-2.302-1.71-2.064
06-2.821-2.6171.341-3.077
070.4420.687-1.963-1.153
08-1.787-3.4231.308-2.302
09-1.8711.279-1.787-2.447
10-2.3021.308-3.957-1.71
11-2.4470.252-0.7110.759
120.4850.313-0.141-1.963
13-0.406-0.081-0.5830.617
140.252-0.7110.74-2.064
150.4680.361-0.291-1.508
160.5250.451-0.797-1.242
17-1.0320.826-0.081-0.828
18-0.291-0.6580.82-0.768
19-1.0320.2830.784-2.064
200.220.652-0.797-0.959
21-0.7110.476-0.4260.22
22-0.995-0.2050.9-1.032
23-1.1110.6310.081-0.347
Standard thresholds
P-value Threshold
0.001 3.07566
0.0005 4.17176
0.0001 6.48676