MotifZN610.H12INVIVO.1.P.C
Gene (human)ZNF610
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
C
Motif length23
ConsensusvbYbvShGCCRCTCCYYMYbvYY
GC content59.84%
Information content (bits; total / per base)17.341 / 0.754
Data sourcesChIP-Seq
Aligned words999

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (11) 0.863 0.978 0.814 0.97 0.893 0.966 6.794 14.168 176.921 315.796
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.89
HGNCHGNC:26687
MGI
EntrezGene (human)GeneID:162963
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN610_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8N9Z0
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01506.0224.0142.0127.0
0272.0199.0161.0567.0
0359.0250.095.0595.0
0467.0229.0135.0568.0
05480.0243.0161.0115.0
0646.0734.0112.0107.0
07573.0203.068.0155.0
0849.050.0840.060.0
0920.0897.032.050.0
1022.0778.025.0174.0
11249.069.0638.043.0
124.0974.010.011.0
1313.019.025.0942.0
147.0925.044.023.0
1531.0840.032.096.0
1621.0672.077.0229.0
1736.0714.070.0179.0
18583.0237.093.086.0
1993.0209.082.0615.0
2065.0360.0190.0384.0
21126.0258.0534.081.0
2239.0733.049.0178.0
2376.0198.0120.0605.0
PFM
ACGT
010.5070.2240.1420.127
020.0720.1990.1610.568
030.0590.250.0950.596
040.0670.2290.1350.569
050.480.2430.1610.115
060.0460.7350.1120.107
070.5740.2030.0680.155
080.0490.050.8410.06
090.020.8980.0320.05
100.0220.7790.0250.174
110.2490.0690.6390.043
120.0040.9750.010.011
130.0130.0190.0250.943
140.0070.9260.0440.023
150.0310.8410.0320.096
160.0210.6730.0770.229
170.0360.7150.070.179
180.5840.2370.0930.086
190.0930.2090.0820.616
200.0650.360.190.384
210.1260.2580.5350.081
220.0390.7340.0490.178
230.0760.1980.120.606
PWM
ACGT
010.703-0.108-0.559-0.67
02-1.227-0.225-0.4350.816
03-1.4210.001-0.9550.864
04-1.297-0.086-0.6090.818
050.65-0.027-0.435-0.768
06-1.6621.074-0.794-0.839
070.827-0.206-1.283-0.473
08-1.601-1.5811.208-1.405
09-2.4491.274-2.009-1.581
10-2.3611.132-2.242-0.358
11-0.003-1.2690.934-1.727
12-3.7821.356-3.065-2.984
13-2.838-2.496-2.2421.322
14-3.3611.304-1.705-2.319
15-2.0391.208-2.009-0.945
16-2.4040.985-1.161-0.086
17-1.8971.046-1.254-0.33
180.844-0.052-0.976-1.053
19-0.976-0.177-1.10.897
20-1.3270.364-0.2710.428
21-0.6770.0320.756-1.112
22-1.821.072-1.601-0.336
23-1.174-0.23-0.7260.881
Standard thresholds
P-value Threshold
0.001 2.54856
0.0005 3.67761
0.0001 6.07846