MotifZN610.H12INVIVO.0.P.B
Gene (human)ZNF610
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length14
ConsensusSvGCCGCTCCYbvb
GC content73.63%
Information content (bits; total / per base)14.927 / 1.066
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (11) 0.926 0.988 0.864 0.979 0.904 0.966 4.427 5.827 318.638 401.456
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.89
HGNCHGNC:26687
MGI
EntrezGene (human)GeneID:162963
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN610_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8N9Z0
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0150.0625.0223.0102.0
02371.0353.0146.0130.0
0344.019.0911.026.0
0425.0930.032.013.0
057.0911.03.079.0
0693.07.0893.07.0
070.0998.00.02.0
081.02.04.0993.0
092.0995.01.02.0
1032.0814.043.0111.0
1122.0547.0158.0273.0
1254.0612.0167.0167.0
13416.0328.0157.099.0
14105.0320.0109.0466.0
PFM
ACGT
010.050.6250.2230.102
020.3710.3530.1460.13
030.0440.0190.9110.026
040.0250.930.0320.013
050.0070.9110.0030.079
060.0930.0070.8930.007
070.00.9980.00.002
080.0010.0020.0040.993
090.0020.9950.0010.002
100.0320.8140.0430.111
110.0220.5470.1580.273
120.0540.6120.1670.167
130.4160.3280.1570.099
140.1050.320.1090.466
PWM
ACGT
01-1.5820.912-0.113-0.887
020.3930.343-0.533-0.648
03-1.706-2.4971.288-2.206
04-2.2431.309-2.01-2.839
05-3.3621.288-3.975-1.137
06-0.977-3.3621.268-3.362
07-4.9821.379-4.982-4.213
08-4.525-4.213-3.7831.374
09-4.2131.376-4.525-4.213
10-2.011.176-1.728-0.803
11-2.3620.779-0.4550.087
12-1.5080.891-0.4-0.4
130.5060.27-0.461-0.916
14-0.8580.245-0.8210.62
Standard thresholds
P-value Threshold
0.001 2.76366
0.0005 4.01451
0.0001 6.58816