MotifZN605.H12CORE.0.P.C
Gene (human)ZNF605
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusYYWRWYYdTGGYYTCTAWhhMCM
GC content44.91%
Information content (bits; total / per base)17.329 / 0.753
Data sourcesChIP-Seq
Aligned words1004

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.845 0.862 0.837 0.856 0.851 0.872 8.53 8.979 278.93 319.149
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF300-like {2.3.3.71} (TFClass)
TFClass IDTFClass: 2.3.3.71.2
HGNCHGNC:28068
MGI
EntrezGene (human)GeneID:100289635
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN605_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q86T29
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01103.0599.0106.0196.0
02100.0630.0104.0170.0
03647.088.0134.0135.0
04148.0147.0637.072.0
05691.0109.083.0121.0
0685.0237.094.0588.0
0771.0452.054.0427.0
08242.052.0152.0558.0
0913.037.0128.0826.0
1043.027.0903.031.0
1147.026.0857.074.0
1221.0243.050.0690.0
1348.0266.0122.0568.0
1421.0128.058.0797.0
157.0933.08.056.0
1623.032.010.0939.0
17817.056.070.061.0
18700.0126.032.0146.0
19498.0157.0132.0217.0
20251.0159.0111.0483.0
21491.0371.080.062.0
2220.0816.023.0145.0
23172.0712.020.0100.0
PFM
ACGT
010.1030.5970.1060.195
020.10.6270.1040.169
030.6440.0880.1330.134
040.1470.1460.6340.072
050.6880.1090.0830.121
060.0850.2360.0940.586
070.0710.450.0540.425
080.2410.0520.1510.556
090.0130.0370.1270.823
100.0430.0270.8990.031
110.0470.0260.8540.074
120.0210.2420.050.687
130.0480.2650.1220.566
140.0210.1270.0580.794
150.0070.9290.0080.056
160.0230.0320.010.935
170.8140.0560.070.061
180.6970.1250.0320.145
190.4960.1560.1310.216
200.250.1580.1110.481
210.4890.370.080.062
220.020.8130.0230.144
230.1710.7090.020.1
PWM
ACGT
01-0.8810.866-0.853-0.245
02-0.910.916-0.871-0.386
030.943-1.036-0.622-0.614
04-0.523-0.530.927-1.232
051.008-0.825-1.093-0.722
06-1.07-0.057-0.9710.847
07-1.2460.585-1.5120.529
08-0.036-1.548-0.4970.795
09-2.843-1.876-0.6671.186
10-1.732-2.1741.275-2.044
11-1.646-2.211.223-1.205
12-2.409-0.032-1.5861.007
13-1.6260.058-0.7140.813
14-2.409-0.667-1.4431.151
15-3.3661.308-3.257-1.477
16-2.324-2.014-3.071.314
171.175-1.477-1.259-1.394
181.021-0.682-2.014-0.537
190.682-0.465-0.637-0.144
200.0-0.453-0.8070.651
210.6680.389-1.129-1.378
22-2.4541.174-2.324-0.544
23-0.3751.038-2.454-0.91
Standard thresholds
P-value Threshold
0.001 2.64106
0.0005 3.74706
0.0001 6.10441