MotifZN587.H12INVITRO.0.P.D
Gene (human)ZNF587
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensushdnbKKGCGCCCAMYRYKRKbMh
GC content61.24%
Information content (bits; total / per base)17.887 / 0.778
Data sourcesChIP-Seq
Aligned words429

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.948 0.977 0.94 0.965 0.939 0.978 7.778 8.628 244.009 256.921
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyZNF417-like {2.3.4.1} (TFClass)
TFClass IDTFClass: 2.3.4.1.2
HGNCHGNC:30955
MGI
EntrezGene (human)GeneID:84914
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN587_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q96SQ5
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0182.0209.048.090.0
02233.044.053.099.0
0390.063.0117.0159.0
0442.0162.0123.0102.0
0519.030.050.0330.0
0646.08.0304.071.0
0717.037.0362.013.0
0810.0380.05.034.0
0966.02.0350.011.0
102.0423.02.02.0
110.0415.01.013.0
1228.0375.016.010.0
13398.09.010.012.0
14311.070.036.012.0
1524.0332.029.044.0
16252.035.0116.026.0
1726.072.034.0297.0
1817.053.0233.0126.0
1948.022.0323.036.0
2048.042.0261.078.0
2153.065.0192.0119.0
2256.0285.045.043.0
2396.0153.047.0133.0
PFM
ACGT
010.1910.4870.1120.21
020.5430.1030.1240.231
030.210.1470.2730.371
040.0980.3780.2870.238
050.0440.070.1170.769
060.1070.0190.7090.166
070.040.0860.8440.03
080.0230.8860.0120.079
090.1540.0050.8160.026
100.0050.9860.0050.005
110.00.9670.0020.03
120.0650.8740.0370.023
130.9280.0210.0230.028
140.7250.1630.0840.028
150.0560.7740.0680.103
160.5870.0820.270.061
170.0610.1680.0790.692
180.040.1240.5430.294
190.1120.0510.7530.084
200.1120.0980.6080.182
210.1240.1520.4480.277
220.1310.6640.1050.1
230.2240.3570.110.31
PWM
ACGT
01-0.2640.66-0.787-0.173
020.768-0.871-0.691-0.079
03-0.173-0.5220.0860.389
04-0.9160.4080.135-0.049
05-1.668-1.239-0.7471.114
06-0.828-2.4361.033-0.405
07-1.771-1.0381.207-2.014
08-2.2461.255-2.815-1.119
09-0.477-3.4321.173-2.162
10-3.4321.362-3.432-3.432
11-4.2741.343-3.767-2.014
12-1.3041.242-1.826-2.246
131.301-2.336-2.246-2.085
141.055-0.419-1.064-2.085
15-1.451.12-1.271-0.871
160.846-1.0910.077-1.374
17-1.374-0.392-1.1191.01
18-1.771-0.6910.7680.159
19-0.787-1.5321.093-1.064
20-0.787-0.9160.881-0.313
21-0.691-0.4920.5760.103
22-0.6370.969-0.849-0.893
23-0.1090.351-0.8070.212
Standard thresholds
P-value Threshold
0.001 2.38766
0.0005 3.54531
0.0001 6.00021