MotifZN584.H12INVITRO.1.P.D
Gene (human)ZNF584
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length14
ConsensushRTTTCAAAAhWGY
GC content29.39%
Information content (bits; total / per base)15.013 / 1.072
Data sourcesChIP-Seq
Aligned words79

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (11) 0.536 0.972 0.429 0.954 0.544 0.98 1.65 6.038 10.013 128.432
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.67
HGNCHGNC:27318
MGI
EntrezGene (human)GeneID:201514
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN584_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8IVC4
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0140.016.08.015.0
0249.06.020.04.0
034.04.00.071.0
042.00.02.075.0
050.02.00.077.0
067.062.01.09.0
0764.09.04.02.0
0867.01.08.03.0
0973.04.01.01.0
1062.04.01.012.0
1128.027.03.021.0
1211.03.05.060.0
136.02.071.00.0
142.059.02.016.0
PFM
ACGT
010.5060.2030.1010.19
020.620.0760.2530.051
030.0510.0510.00.899
040.0250.00.0250.949
050.00.0250.00.975
060.0890.7850.0130.114
070.810.1140.0510.025
080.8480.0130.1010.038
090.9240.0510.0130.013
100.7850.0510.0130.152
110.3540.3420.0380.266
120.1390.0380.0630.759
130.0760.0250.8990.0
140.0250.7470.0250.203
PWM
ACGT
010.679-0.198-0.83-0.259
020.877-1.0780.012-1.409
03-1.409-1.409-2.9491.241
04-1.908-2.949-1.9081.295
05-2.949-1.908-2.9491.321
06-0.9461.108-2.299-0.725
071.139-0.725-1.409-1.908
081.184-2.299-0.83-1.628
091.268-1.409-2.299-2.299
101.108-1.409-2.299-0.465
110.3330.299-1.6280.058
12-0.544-1.628-1.231.075
13-1.078-1.9081.241-2.949
14-1.9081.059-1.908-0.198
Standard thresholds
P-value Threshold
0.001 3.83456
0.0005 4.81281
0.0001 6.878065