MotifZN582.H12INVIVO.0.P.C
Gene (human)ZNF582
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length11
ConsensusGRMTGCAAKKR
GC content52.91%
Information content (bits; total / per base)12.278 / 1.116
Data sourcesChIP-Seq
Aligned words546

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.684 0.757 0.592 0.707 0.793 0.824 3.265 4.273 48.854 92.921
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF620-like {2.3.3.35} (TFClass)
TFClass IDTFClass: 2.3.3.35.7
HGNCHGNC:26421
MGI
EntrezGene (human)GeneID:147948
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN582_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q96NG8
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01136.04.0397.09.0
02103.011.0339.093.0
0374.0427.029.016.0
0430.04.012.0500.0
051.06.0536.03.0
0613.0483.043.07.0
07526.012.04.04.0
08442.014.074.016.0
0918.023.0395.0110.0
1011.035.0155.0345.0
11349.018.0157.022.0
PFM
ACGT
010.2490.0070.7270.016
020.1890.020.6210.17
030.1360.7820.0530.029
040.0550.0070.0220.916
050.0020.0110.9820.005
060.0240.8850.0790.013
070.9630.0220.0070.007
080.810.0260.1360.029
090.0330.0420.7230.201
100.020.0640.2840.632
110.6390.0330.2880.04
PWM
ACGT
01-0.004-3.2091.06-2.569
02-0.278-2.3960.903-0.378
03-0.6031.133-1.508-2.061
04-1.475-3.209-2.321.29
05-3.982-2.9031.359-3.407
06-2.2481.255-1.131-2.779
071.34-2.32-3.209-3.209
081.167-2.182-0.603-2.061
09-1.954-1.7261.055-0.213
10-2.396-1.3280.1260.92
110.932-1.9540.138-1.768
Standard thresholds
P-value Threshold
0.001 4.130075
0.0005 5.107595
0.0001 7.13392