| Motif | ZN582.H12INVITRO.0.P.D |
| Gene (human) | ZNF582 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZN582.H12INVITRO.0.P.D |
| Gene (human) | ZNF582 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 11 |
| Consensus | GRMTGCAAKKR |
| GC content | 52.91% |
| Information content (bits; total / per base) | 12.278 / 1.116 |
| Data sources | ChIP-Seq |
| Aligned words | 546 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (5) | 0.684 | 0.757 | 0.592 | 0.707 | 0.793 | 0.824 | 3.265 | 4.273 | 48.854 | 92.921 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF620-like {2.3.3.35} (TFClass) |
| TFClass ID | TFClass: 2.3.3.35.7 |
| HGNC | HGNC:26421 |
| MGI | |
| EntrezGene (human) | GeneID:147948 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN582_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q96NG8 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN582.H12INVITRO.0.P.D.pcm |
| PWM | ZN582.H12INVITRO.0.P.D.pwm |
| PFM | ZN582.H12INVITRO.0.P.D.pfm |
| Alignment | ZN582.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | ZN582.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN582.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | ZN582.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | ZN582.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 136.0 | 4.0 | 397.0 | 9.0 |
| 02 | 103.0 | 11.0 | 339.0 | 93.0 |
| 03 | 74.0 | 427.0 | 29.0 | 16.0 |
| 04 | 30.0 | 4.0 | 12.0 | 500.0 |
| 05 | 1.0 | 6.0 | 536.0 | 3.0 |
| 06 | 13.0 | 483.0 | 43.0 | 7.0 |
| 07 | 526.0 | 12.0 | 4.0 | 4.0 |
| 08 | 442.0 | 14.0 | 74.0 | 16.0 |
| 09 | 18.0 | 23.0 | 395.0 | 110.0 |
| 10 | 11.0 | 35.0 | 155.0 | 345.0 |
| 11 | 349.0 | 18.0 | 157.0 | 22.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.249 | 0.007 | 0.727 | 0.016 |
| 02 | 0.189 | 0.02 | 0.621 | 0.17 |
| 03 | 0.136 | 0.782 | 0.053 | 0.029 |
| 04 | 0.055 | 0.007 | 0.022 | 0.916 |
| 05 | 0.002 | 0.011 | 0.982 | 0.005 |
| 06 | 0.024 | 0.885 | 0.079 | 0.013 |
| 07 | 0.963 | 0.022 | 0.007 | 0.007 |
| 08 | 0.81 | 0.026 | 0.136 | 0.029 |
| 09 | 0.033 | 0.042 | 0.723 | 0.201 |
| 10 | 0.02 | 0.064 | 0.284 | 0.632 |
| 11 | 0.639 | 0.033 | 0.288 | 0.04 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.004 | -3.209 | 1.06 | -2.569 |
| 02 | -0.278 | -2.396 | 0.903 | -0.378 |
| 03 | -0.603 | 1.133 | -1.508 | -2.061 |
| 04 | -1.475 | -3.209 | -2.32 | 1.29 |
| 05 | -3.982 | -2.903 | 1.359 | -3.407 |
| 06 | -2.248 | 1.255 | -1.131 | -2.779 |
| 07 | 1.34 | -2.32 | -3.209 | -3.209 |
| 08 | 1.167 | -2.182 | -0.603 | -2.061 |
| 09 | -1.954 | -1.726 | 1.055 | -0.213 |
| 10 | -2.396 | -1.328 | 0.126 | 0.92 |
| 11 | 0.932 | -1.954 | 0.138 | -1.768 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.130075 |
| 0.0005 | 5.107595 |
| 0.0001 | 7.13392 |