MotifZN577.H12INVITRO.0.P.D
Gene (human)ZNF577
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length19
ConsensusdMvvvvCYYCTTRAGShSY
GC content59.81%
Information content (bits; total / per base)16.297 / 0.858
Data sourcesChIP-Seq
Aligned words280

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.666 0.873 0.646 0.881 0.636 0.872 3.025 5.716 125.367 408.824
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF350-like {2.3.3.30} (TFClass)
TFClass IDTFClass: 2.3.3.30.2
HGNCHGNC:28673
MGI
EntrezGene (human)GeneID:84765
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN577_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9BSK1
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0162.031.0149.038.0
0244.0169.038.029.0
03126.089.034.031.0
04105.042.0111.022.0
0573.059.0110.038.0
0681.053.0119.027.0
0714.0245.010.011.0
0844.0186.01.049.0
098.0150.06.0116.0
101.0278.01.00.0
117.011.00.0262.0
1210.021.07.0242.0
1388.05.0186.01.0
14275.00.03.02.0
151.00.0279.00.0
161.0133.0145.01.0
1779.0136.018.047.0
189.0212.038.021.0
1919.092.015.0154.0
PFM
ACGT
010.2210.1110.5320.136
020.1570.6040.1360.104
030.450.3180.1210.111
040.3750.150.3960.079
050.2610.2110.3930.136
060.2890.1890.4250.096
070.050.8750.0360.039
080.1570.6640.0040.175
090.0290.5360.0210.414
100.0040.9930.0040.0
110.0250.0390.00.936
120.0360.0750.0250.864
130.3140.0180.6640.004
140.9820.00.0110.007
150.0040.00.9960.0
160.0040.4750.5180.004
170.2820.4860.0640.168
180.0320.7570.1360.075
190.0680.3290.0540.55
PWM
ACGT
01-0.119-0.790.745-0.594
02-0.4530.87-0.594-0.854
030.5790.236-0.701-0.79
040.399-0.4980.454-1.115
050.041-0.1670.445-0.594
060.143-0.2720.522-0.922
07-1.5331.239-1.834-1.75
08-0.4530.965-3.389-0.348
09-2.0270.752-2.2660.497
10-3.3891.364-3.389-3.926
11-2.139-1.75-3.9261.305
12-1.834-1.159-2.1391.226
130.225-2.4110.965-3.389
141.353-3.926-2.785-3.042
15-3.389-3.9261.368-3.926
16-3.3890.6320.718-3.389
170.1190.655-1.303-0.389
18-1.9261.095-0.594-1.159
19-1.2520.269-1.4710.778
Standard thresholds
P-value Threshold
0.001 2.68806
0.0005 3.88831
0.0001 6.39581