MotifZN570.H12INVIVO.0.P.C
Gene (human)ZNF570
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length19
ConsensusWGAhAWMWYnMMAGAAAAY
GC content26.99%
Information content (bits; total / per base)20.531 / 1.081
Data sourcesChIP-Seq
Aligned words125

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (2) 0.962 0.962 0.94 0.94 0.971 0.971 6.974 6.974 58.114 58.114
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF642-like {2.3.3.31} (TFClass)
TFClass IDTFClass: 2.3.3.31.3
HGNCHGNC:26416
MGI
EntrezGene (human)GeneID:148268
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN570_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q96NI8
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0195.07.02.021.0
0223.00.0102.00.0
03122.03.00.00.0
0429.026.05.065.0
05112.010.02.01.0
0623.08.08.086.0
0782.025.011.07.0
0886.09.014.016.0
0913.033.05.074.0
1064.021.020.020.0
1133.076.08.08.0
1293.019.00.013.0
13102.02.07.014.0
140.00.0125.00.0
15125.00.00.00.0
16118.06.01.00.0
17124.00.01.00.0
18110.03.010.02.0
190.055.017.053.0
PFM
ACGT
010.760.0560.0160.168
020.1840.00.8160.0
030.9760.0240.00.0
040.2320.2080.040.52
050.8960.080.0160.008
060.1840.0640.0640.688
070.6560.20.0880.056
080.6880.0720.1120.128
090.1040.2640.040.592
100.5120.1680.160.16
110.2640.6080.0640.064
120.7440.1520.00.104
130.8160.0160.0560.112
140.00.01.00.0
151.00.00.00.0
160.9440.0480.0080.0
170.9920.00.0080.0
180.880.0240.080.016
190.00.440.1360.424
PWM
ACGT
011.087-1.375-2.315-0.38
02-0.293-3.2921.157-3.292
031.334-2.043-3.292-3.292
04-0.072-0.176-1.6540.713
051.249-1.063-2.315-2.688
06-0.293-1.26-1.260.988
070.941-0.214-0.978-1.375
080.988-1.157-0.758-0.635
09-0.8260.053-1.6540.84
100.698-0.38-0.426-0.426
110.0530.867-1.26-1.26
121.066-0.474-3.292-0.826
131.157-2.315-1.375-0.758
14-3.292-3.2921.358-3.292
151.358-3.292-3.292-3.292
161.301-1.505-2.688-3.292
171.35-3.292-2.688-3.292
181.231-2.043-1.063-2.315
19-3.2920.549-0.5780.513
Standard thresholds
P-value Threshold
0.001 1.42276
0.0005 2.71306
0.0001 5.44726