MotifZN567.H12INVIVO.0.P.C
Gene (human)ZNF567
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length30
ConsensusAWhMddYMRYARAAvYAGAYMYWvRRRWRv
GC content39.77%
Information content (bits; total / per base)22.978 / 0.766
Data sourcesChIP-Seq
Aligned words1002

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.947 0.953 0.935 0.94 0.963 0.972 11.094 11.186 503.364 539.149
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF25-like {2.3.3.69} (TFClass)
TFClass IDTFClass: 2.3.3.69.4
HGNCHGNC:28696
MGI
EntrezGene (human)GeneID:163081
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN567_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8N184
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01809.043.091.059.0
02612.091.0146.0153.0
03161.0568.094.0179.0
04774.096.074.058.0
05338.074.0494.096.0
06262.0121.0134.0485.0
07147.0632.071.0152.0
08708.0129.070.095.0
09683.0103.0119.097.0
1089.0275.041.0597.0
11908.026.026.042.0
12277.086.0579.060.0
13961.02.034.05.0
14940.013.028.021.0
15436.0129.0384.053.0
16125.0575.039.0263.0
17907.09.031.055.0
1838.012.0939.013.0
19861.04.0133.04.0
2059.0761.032.0150.0
21157.0680.032.0133.0
22122.0686.026.0168.0
23587.0115.063.0237.0
24158.0305.0419.0120.0
25792.056.0115.039.0
26292.030.0593.087.0
27724.049.0178.051.0
28105.050.096.0751.0
29151.043.0732.076.0
30529.0247.0131.095.0
PFM
ACGT
010.8070.0430.0910.059
020.6110.0910.1460.153
030.1610.5670.0940.179
040.7720.0960.0740.058
050.3370.0740.4930.096
060.2610.1210.1340.484
070.1470.6310.0710.152
080.7070.1290.070.095
090.6820.1030.1190.097
100.0890.2740.0410.596
110.9060.0260.0260.042
120.2760.0860.5780.06
130.9590.0020.0340.005
140.9380.0130.0280.021
150.4350.1290.3830.053
160.1250.5740.0390.262
170.9050.0090.0310.055
180.0380.0120.9370.013
190.8590.0040.1330.004
200.0590.7590.0320.15
210.1570.6790.0320.133
220.1220.6850.0260.168
230.5860.1150.0630.237
240.1580.3040.4180.12
250.790.0560.1150.039
260.2910.030.5920.087
270.7230.0490.1780.051
280.1050.050.0960.75
290.1510.0430.7310.076
300.5280.2470.1310.095
PWM
ACGT
011.168-1.73-1.001-1.424
020.889-1.001-0.535-0.489
03-0.4380.815-0.969-0.333
041.123-0.948-1.203-1.441
050.298-1.2030.676-0.948
060.045-0.72-0.620.657
07-0.5280.921-1.244-0.495
081.035-0.657-1.257-0.958
090.999-0.879-0.737-0.938
10-1.0220.093-1.7750.864
111.283-2.208-2.208-1.752
120.1-1.0560.834-1.408
131.339-4.215-1.954-3.624
141.317-2.841-2.138-2.407
150.551-0.6570.425-1.528
16-0.6880.827-1.8230.048
171.282-3.158-2.042-1.492
18-1.848-2.9111.316-2.841
191.23-3.785-0.627-3.785
20-1.4241.107-2.012-0.508
21-0.4630.994-2.012-0.627
22-0.7121.003-2.208-0.396
230.848-0.77-1.36-0.055
24-0.4570.1960.512-0.729
251.146-1.475-0.77-1.823
260.152-2.0730.858-1.045
271.057-1.604-0.339-1.565
28-0.86-1.584-0.9481.093
29-0.502-1.731.068-1.177
300.744-0.014-0.642-0.958
Standard thresholds
P-value Threshold
0.001 0.31881
0.0005 1.62841
0.0001 4.43086