| Motif | ZN565.H12RSNP.0.P.D |
| Gene (human) | ZNF565 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZN565.H12RSNP.0.P.D |
| Gene (human) | ZNF565 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 31 |
| Consensus | RGChRCCATRYTGKRAGGAMGCYCARSYhvY |
| GC content | 57.63% |
| Information content (bits; total / per base) | 32.878 / 1.061 |
| Data sources | ChIP-Seq |
| Aligned words | 705 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (2) | 0.942 | 0.942 | 0.93 | 0.93 | 0.926 | 0.926 | 16.026 | 16.026 | 407.409 | 407.409 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.146 |
| HGNC | HGNC:26726 |
| MGI | |
| EntrezGene (human) | GeneID:147929 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN565_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q8N9K5 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN565.H12RSNP.0.P.D.pcm |
| PWM | ZN565.H12RSNP.0.P.D.pwm |
| PFM | ZN565.H12RSNP.0.P.D.pfm |
| Alignment | ZN565.H12RSNP.0.P.D.words.tsv |
| Threshold to P-value map | ZN565.H12RSNP.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN565.H12RSNP.0.P.D_jaspar_format.txt |
| MEME format | ZN565.H12RSNP.0.P.D_meme_format.meme |
| Transfac format | ZN565.H12RSNP.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 389.0 | 31.0 | 253.0 | 32.0 |
| 02 | 87.0 | 23.0 | 569.0 | 26.0 |
| 03 | 42.0 | 596.0 | 18.0 | 49.0 |
| 04 | 106.0 | 338.0 | 38.0 | 223.0 |
| 05 | 206.0 | 10.0 | 445.0 | 44.0 |
| 06 | 14.0 | 677.0 | 8.0 | 6.0 |
| 07 | 4.0 | 698.0 | 1.0 | 2.0 |
| 08 | 676.0 | 14.0 | 6.0 | 9.0 |
| 09 | 10.0 | 14.0 | 8.0 | 673.0 |
| 10 | 94.0 | 39.0 | 537.0 | 35.0 |
| 11 | 33.0 | 289.0 | 31.0 | 352.0 |
| 12 | 18.0 | 49.0 | 8.0 | 630.0 |
| 13 | 65.0 | 15.0 | 593.0 | 32.0 |
| 14 | 25.0 | 24.0 | 116.0 | 540.0 |
| 15 | 133.0 | 47.0 | 501.0 | 24.0 |
| 16 | 641.0 | 7.0 | 46.0 | 11.0 |
| 17 | 7.0 | 6.0 | 687.0 | 5.0 |
| 18 | 14.0 | 9.0 | 679.0 | 3.0 |
| 19 | 603.0 | 35.0 | 54.0 | 13.0 |
| 20 | 530.0 | 89.0 | 24.0 | 62.0 |
| 21 | 113.0 | 26.0 | 557.0 | 9.0 |
| 22 | 14.0 | 652.0 | 11.0 | 28.0 |
| 23 | 28.0 | 428.0 | 19.0 | 230.0 |
| 24 | 22.0 | 644.0 | 21.0 | 18.0 |
| 25 | 619.0 | 28.0 | 20.0 | 38.0 |
| 26 | 534.0 | 35.0 | 116.0 | 20.0 |
| 27 | 67.0 | 71.0 | 511.0 | 56.0 |
| 28 | 44.0 | 481.0 | 82.0 | 98.0 |
| 29 | 301.0 | 209.0 | 67.0 | 128.0 |
| 30 | 247.0 | 91.0 | 320.0 | 47.0 |
| 31 | 41.0 | 495.0 | 78.0 | 91.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.552 | 0.044 | 0.359 | 0.045 |
| 02 | 0.123 | 0.033 | 0.807 | 0.037 |
| 03 | 0.06 | 0.845 | 0.026 | 0.07 |
| 04 | 0.15 | 0.479 | 0.054 | 0.316 |
| 05 | 0.292 | 0.014 | 0.631 | 0.062 |
| 06 | 0.02 | 0.96 | 0.011 | 0.009 |
| 07 | 0.006 | 0.99 | 0.001 | 0.003 |
| 08 | 0.959 | 0.02 | 0.009 | 0.013 |
| 09 | 0.014 | 0.02 | 0.011 | 0.955 |
| 10 | 0.133 | 0.055 | 0.762 | 0.05 |
| 11 | 0.047 | 0.41 | 0.044 | 0.499 |
| 12 | 0.026 | 0.07 | 0.011 | 0.894 |
| 13 | 0.092 | 0.021 | 0.841 | 0.045 |
| 14 | 0.035 | 0.034 | 0.165 | 0.766 |
| 15 | 0.189 | 0.067 | 0.711 | 0.034 |
| 16 | 0.909 | 0.01 | 0.065 | 0.016 |
| 17 | 0.01 | 0.009 | 0.974 | 0.007 |
| 18 | 0.02 | 0.013 | 0.963 | 0.004 |
| 19 | 0.855 | 0.05 | 0.077 | 0.018 |
| 20 | 0.752 | 0.126 | 0.034 | 0.088 |
| 21 | 0.16 | 0.037 | 0.79 | 0.013 |
| 22 | 0.02 | 0.925 | 0.016 | 0.04 |
| 23 | 0.04 | 0.607 | 0.027 | 0.326 |
| 24 | 0.031 | 0.913 | 0.03 | 0.026 |
| 25 | 0.878 | 0.04 | 0.028 | 0.054 |
| 26 | 0.757 | 0.05 | 0.165 | 0.028 |
| 27 | 0.095 | 0.101 | 0.725 | 0.079 |
| 28 | 0.062 | 0.682 | 0.116 | 0.139 |
| 29 | 0.427 | 0.296 | 0.095 | 0.182 |
| 30 | 0.35 | 0.129 | 0.454 | 0.067 |
| 31 | 0.058 | 0.702 | 0.111 | 0.129 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.787 | -1.696 | 0.359 | -1.665 |
| 02 | -0.697 | -1.977 | 1.166 | -1.862 |
| 03 | -1.405 | 1.212 | -2.204 | -1.256 |
| 04 | -0.502 | 0.647 | -1.501 | 0.233 |
| 05 | 0.155 | -2.727 | 0.921 | -1.36 |
| 06 | -2.431 | 1.339 | -2.915 | -3.148 |
| 07 | -3.451 | 1.369 | -4.211 | -3.889 |
| 08 | 1.337 | -2.431 | -3.148 | -2.817 |
| 09 | -2.727 | -2.431 | -2.915 | 1.333 |
| 10 | -0.621 | -1.476 | 1.108 | -1.58 |
| 11 | -1.636 | 0.491 | -1.696 | 0.687 |
| 12 | -2.204 | -1.256 | -2.915 | 1.267 |
| 13 | -0.982 | -2.369 | 1.207 | -1.665 |
| 14 | -1.899 | -1.937 | -0.414 | 1.113 |
| 15 | -0.279 | -1.297 | 1.039 | -1.937 |
| 16 | 1.284 | -3.025 | -1.317 | -2.644 |
| 17 | -3.025 | -3.148 | 1.354 | -3.288 |
| 18 | -2.431 | -2.817 | 1.342 | -3.647 |
| 19 | 1.223 | -1.58 | -1.162 | -2.497 |
| 20 | 1.095 | -0.674 | -1.937 | -1.028 |
| 21 | -0.439 | -1.862 | 1.144 | -2.817 |
| 22 | -2.431 | 1.301 | -2.644 | -1.792 |
| 23 | -1.792 | 0.882 | -2.154 | 0.264 |
| 24 | -2.018 | 1.289 | -2.061 | -2.204 |
| 25 | 1.25 | -1.792 | -2.107 | -1.501 |
| 26 | 1.102 | -1.58 | -0.414 | -2.107 |
| 27 | -0.952 | -0.896 | 1.058 | -1.127 |
| 28 | -1.36 | 0.998 | -0.755 | -0.58 |
| 29 | 0.531 | 0.169 | -0.952 | -0.316 |
| 30 | 0.335 | -0.652 | 0.592 | -1.297 |
| 31 | -1.428 | 1.027 | -0.804 | -0.652 |
| P-value | Threshold |
|---|---|
| 0.001 | -5.50104 |
| 0.0005 | -3.83174 |
| 0.0001 | -0.23719 |