MotifZN565.H12INVITRO.0.P.D
Gene (human)ZNF565
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length31
ConsensusRGChRCCATRYTGKRAGGAMGCYCARSYhvY
GC content57.63%
Information content (bits; total / per base)32.878 / 1.061
Data sourcesChIP-Seq
Aligned words705

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (2) 0.942 0.942 0.93 0.93 0.926 0.926 16.026 16.026 407.409 407.409
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.146
HGNCHGNC:26726
MGI
EntrezGene (human)GeneID:147929
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN565_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8N9K5
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01389.031.0253.032.0
0287.023.0569.026.0
0342.0596.018.049.0
04106.0338.038.0223.0
05206.010.0445.044.0
0614.0677.08.06.0
074.0698.01.02.0
08676.014.06.09.0
0910.014.08.0673.0
1094.039.0537.035.0
1133.0289.031.0352.0
1218.049.08.0630.0
1365.015.0593.032.0
1425.024.0116.0540.0
15133.047.0501.024.0
16641.07.046.011.0
177.06.0687.05.0
1814.09.0679.03.0
19603.035.054.013.0
20530.089.024.062.0
21113.026.0557.09.0
2214.0652.011.028.0
2328.0428.019.0230.0
2422.0644.021.018.0
25619.028.020.038.0
26534.035.0116.020.0
2767.071.0511.056.0
2844.0481.082.098.0
29301.0209.067.0128.0
30247.091.0320.047.0
3141.0495.078.091.0
PFM
ACGT
010.5520.0440.3590.045
020.1230.0330.8070.037
030.060.8450.0260.07
040.150.4790.0540.316
050.2920.0140.6310.062
060.020.960.0110.009
070.0060.990.0010.003
080.9590.020.0090.013
090.0140.020.0110.955
100.1330.0550.7620.05
110.0470.410.0440.499
120.0260.070.0110.894
130.0920.0210.8410.045
140.0350.0340.1650.766
150.1890.0670.7110.034
160.9090.010.0650.016
170.010.0090.9740.007
180.020.0130.9630.004
190.8550.050.0770.018
200.7520.1260.0340.088
210.160.0370.790.013
220.020.9250.0160.04
230.040.6070.0270.326
240.0310.9130.030.026
250.8780.040.0280.054
260.7570.050.1650.028
270.0950.1010.7250.079
280.0620.6820.1160.139
290.4270.2960.0950.182
300.350.1290.4540.067
310.0580.7020.1110.129
PWM
ACGT
010.787-1.6960.359-1.665
02-0.697-1.9771.166-1.862
03-1.4051.212-2.204-1.256
04-0.5020.647-1.5010.233
050.155-2.7270.921-1.36
06-2.4311.339-2.915-3.148
07-3.4511.369-4.211-3.889
081.337-2.431-3.148-2.817
09-2.727-2.431-2.9151.333
10-0.621-1.4761.108-1.58
11-1.6360.491-1.6960.687
12-2.204-1.256-2.9151.267
13-0.982-2.3691.207-1.665
14-1.899-1.937-0.4141.113
15-0.279-1.2971.039-1.937
161.284-3.025-1.317-2.644
17-3.025-3.1481.354-3.288
18-2.431-2.8171.342-3.647
191.223-1.58-1.162-2.497
201.095-0.674-1.937-1.028
21-0.439-1.8621.144-2.817
22-2.4311.301-2.644-1.792
23-1.7920.882-2.1540.264
24-2.0181.289-2.061-2.204
251.25-1.792-2.107-1.501
261.102-1.58-0.414-2.107
27-0.952-0.8961.058-1.127
28-1.360.998-0.755-0.58
290.5310.169-0.952-0.316
300.335-0.6520.592-1.297
31-1.4281.027-0.804-0.652
Standard thresholds
P-value Threshold
0.001 -5.50104
0.0005 -3.83174
0.0001 -0.23719