MotifZN564.H12INVIVO.0.P.C
Gene (human)ZNF564
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusTTGGACTTCCCAGCCTCCAGAAC
GC content54.81%
Information content (bits; total / per base)36.384 / 1.582
Data sourcesChIP-Seq
Aligned words859

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.969 0.982 0.969 0.981 0.97 0.987 19.042 19.575 299.407 406.252
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF763-like {2.3.3.33} (TFClass)
TFClass IDTFClass: 2.3.3.33.16
HGNCHGNC:31106
MGI
EntrezGene (human)GeneID:163050
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN564_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8TBZ8
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
014.011.02.0842.0
0219.09.022.0809.0
0311.02.0841.05.0
0461.010.0784.04.0
05840.08.09.02.0
063.0840.05.011.0
074.07.01.0847.0
086.09.021.0823.0
0911.0734.047.067.0
1039.0783.019.018.0
112.0853.01.03.0
12828.011.011.09.0
1330.012.0797.020.0
147.0788.07.057.0
151.0850.01.07.0
1632.0114.05.0708.0
172.0790.036.031.0
1812.0678.018.0151.0
19820.02.029.08.0
2015.027.0799.018.0
21826.06.019.08.0
22756.023.074.06.0
2312.0702.011.0134.0
PFM
ACGT
010.0050.0130.0020.98
020.0220.010.0260.942
030.0130.0020.9790.006
040.0710.0120.9130.005
050.9780.0090.010.002
060.0030.9780.0060.013
070.0050.0080.0010.986
080.0070.010.0240.958
090.0130.8540.0550.078
100.0450.9120.0220.021
110.0020.9930.0010.003
120.9640.0130.0130.01
130.0350.0140.9280.023
140.0080.9170.0080.066
150.0010.990.0010.008
160.0370.1330.0060.824
170.0020.920.0420.036
180.0140.7890.0210.176
190.9550.0020.0340.009
200.0170.0310.930.021
210.9620.0070.0220.009
220.880.0270.0860.007
230.0140.8170.0130.156
PWM
ACGT
01-3.639-2.837-4.0721.36
02-2.348-3.008-2.2121.321
03-2.837-4.0721.359-3.477
04-1.239-2.9191.289-3.639
051.358-3.106-3.008-4.072
06-3.8321.358-3.477-2.837
07-3.639-3.215-4.3881.366
08-3.338-3.008-2.2551.338
09-2.8371.223-1.492-1.148
10-1.6711.288-2.348-2.397
11-4.0721.373-4.388-3.832
121.344-2.837-2.837-3.008
13-1.921-2.7611.306-2.301
14-3.2151.294-3.215-1.305
15-4.3881.37-4.388-3.215
16-1.86-0.626-3.4771.188
17-4.0721.297-1.748-1.89
18-2.7611.144-2.397-0.349
191.334-4.072-1.953-3.106
20-2.563-2.0211.308-2.397
211.341-3.338-2.348-3.106
221.253-2.171-1.051-3.338
23-2.7611.179-2.837-0.467
Standard thresholds
P-value Threshold
0.001 -10.76884
0.0005 -8.78319
0.0001 -4.50434