MotifZN563.H12INVITRO.1.P.D
Gene (human)ZNF563
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length15
ConsensusbvvWGRMAKCWbhdv
GC content61.47%
Information content (bits; total / per base)9.538 / 0.636
Data sourcesChIP-Seq
Aligned words1002

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.692 0.694 0.547 0.554 0.679 0.689 2.013 2.047 91.456 104.137
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF763-like {2.3.3.33} (TFClass)
TFClass IDTFClass: 2.3.3.33.12
HGNCHGNC:30498
MGI
EntrezGene (human)GeneID:147837
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN563_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8TA94
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01107.0445.0337.0113.0
02419.0283.0182.0118.0
03160.0552.0243.047.0
04492.095.027.0388.0
0565.020.0884.033.0
06128.097.0716.061.0
07160.0766.058.018.0
08922.06.04.070.0
0998.013.0791.0100.0
1019.0885.077.021.0
11588.064.087.0263.0
1280.0299.0529.094.0
13324.0425.098.0155.0
14306.0119.0412.0165.0
15144.0464.0261.0133.0
PFM
ACGT
010.1070.4440.3360.113
020.4180.2820.1820.118
030.160.5510.2430.047
040.4910.0950.0270.387
050.0650.020.8820.033
060.1280.0970.7150.061
070.160.7640.0580.018
080.920.0060.0040.07
090.0980.0130.7890.1
100.0190.8830.0770.021
110.5870.0640.0870.262
120.080.2980.5280.094
130.3230.4240.0980.155
140.3050.1190.4110.165
150.1440.4630.260.133
PWM
ACGT
01-0.8410.5720.295-0.788
020.5120.121-0.317-0.745
03-0.4440.786-0.03-1.644
040.672-0.958-2.1720.435
05-1.33-2.4521.256-1.983
06-0.665-0.9381.046-1.392
07-0.4441.113-1.441-2.548
081.298-3.486-3.785-1.257
09-0.928-2.8411.145-0.908
10-2.4991.257-1.164-2.407
110.849-1.345-1.0450.048
12-1.1270.1760.744-0.969
130.2560.526-0.928-0.476
140.199-0.7370.495-0.414
15-0.5490.6130.041-0.627
Standard thresholds
P-value Threshold
0.001 4.78171
0.0005 5.56021
0.0001 7.16746