MotifZN563.H12CORE.0.P.C
Gene (human)ZNF563
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length21
ConsensusdKdnTCMYbdvhdKSMvChKh
GC content58.77%
Information content (bits; total / per base)11.208 / 0.534
Data sourcesChIP-Seq
Aligned words952

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.794 0.81 0.731 0.743 0.759 0.781 3.061 3.156 288.658 294.0
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF763-like {2.3.3.33} (TFClass)
TFClass IDTFClass: 2.3.3.33.12
HGNCHGNC:30498
MGI
EntrezGene (human)GeneID:147837
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN563_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8TA94
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01263.093.0456.0140.0
0282.092.0675.0103.0
03184.093.0511.0164.0
04233.0269.0262.0188.0
0521.029.0156.0746.0
061.0747.031.0173.0
07231.0576.020.0125.0
0868.0162.0106.0616.0
09101.0333.0292.0226.0
10316.0116.0227.0293.0
11113.0546.0188.0105.0
12187.0359.024.0382.0
13169.082.0527.0174.0
1468.065.0660.0159.0
1538.0690.0208.016.0
16654.0225.06.067.0
17288.099.0493.072.0
1812.0872.011.057.0
19179.0155.087.0531.0
2050.091.0688.0123.0
21122.0323.0105.0402.0
PFM
ACGT
010.2760.0980.4790.147
020.0860.0970.7090.108
030.1930.0980.5370.172
040.2450.2830.2750.197
050.0220.030.1640.784
060.0010.7850.0330.182
070.2430.6050.0210.131
080.0710.170.1110.647
090.1060.350.3070.237
100.3320.1220.2380.308
110.1190.5740.1970.11
120.1960.3770.0250.401
130.1780.0860.5540.183
140.0710.0680.6930.167
150.040.7250.2180.017
160.6870.2360.0060.07
170.3030.1040.5180.076
180.0130.9160.0120.06
190.1880.1630.0910.558
200.0530.0960.7230.129
210.1280.3390.110.422
PWM
ACGT
010.099-0.9290.647-0.526
02-1.052-0.9391.038-0.828
03-0.255-0.9290.76-0.369
04-0.0210.1220.095-0.234
05-2.356-2.055-0.4191.138
06-4.4811.139-1.992-0.316
07-0.030.88-2.401-0.638
08-1.235-0.381-0.80.947
09-0.8470.3340.203-0.051
100.282-0.711-0.0470.207
11-0.7370.826-0.234-0.809
12-0.2390.409-2.2320.47
13-0.339-1.0520.791-0.311
14-1.235-1.2791.015-0.4
15-1.7981.06-0.134-2.605
161.006-0.056-3.436-1.249
170.189-0.8670.725-1.179
18-2.8611.293-2.937-1.407
19-0.283-0.425-0.9940.799
20-1.534-0.951.057-0.653
21-0.6610.303-0.8090.521
Standard thresholds
P-value Threshold
0.001 4.46986
0.0005 5.31491
0.0001 7.08496