MotifZN547.H12INVIVO.0.P.B
Gene (human)ZNF547
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length22
ConsensusnWSCWMAYKChRCMRRCRndCh
GC content51.09%
Information content (bits; total / per base)16.464 / 0.748
Data sourcesChIP-Seq
Aligned words731

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 3 (15) 0.815 0.895 0.791 0.85 0.785 0.853 5.354 5.848 260.699 355.886
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.97
HGNCHGNC:26432
MGI
EntrezGene (human)GeneID:284306
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN547_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8IVP9
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 3 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01105.0155.0251.0220.0
0299.086.073.0473.0
0350.072.0576.033.0
0424.0596.02.0109.0
05200.064.058.0409.0
06533.089.075.034.0
07695.06.028.02.0
08105.0144.027.0455.0
093.038.0402.0288.0
102.0728.01.00.0
11283.0118.053.0277.0
12178.023.0492.038.0
1310.0650.014.057.0
14572.082.020.057.0
15237.063.0386.045.0
16159.046.0475.051.0
1775.0596.019.041.0
18481.058.0135.057.0
19132.0168.0157.0274.0
20341.048.0272.070.0
2130.0591.063.047.0
22386.0164.052.0129.0
PFM
ACGT
010.1440.2120.3430.301
020.1350.1180.10.647
030.0680.0980.7880.045
040.0330.8150.0030.149
050.2740.0880.0790.56
060.7290.1220.1030.047
070.9510.0080.0380.003
080.1440.1970.0370.622
090.0040.0520.550.394
100.0030.9960.0010.0
110.3870.1610.0730.379
120.2440.0310.6730.052
130.0140.8890.0190.078
140.7820.1120.0270.078
150.3240.0860.5280.062
160.2180.0630.650.07
170.1030.8150.0260.056
180.6580.0790.1850.078
190.1810.230.2150.375
200.4660.0660.3720.096
210.0410.8080.0860.064
220.5280.2240.0710.176
PWM
ACGT
01-0.548-0.1630.3150.184
02-0.605-0.744-0.9040.945
03-1.273-0.9181.142-1.672
04-1.9731.176-3.923-0.511
050.089-1.033-1.1290.801
061.065-0.71-0.878-1.643
071.329-3.183-1.828-3.923
08-0.548-0.236-1.8620.907
09-3.681-1.5370.7830.452
10-3.9231.375-4.243-4.717
110.434-0.433-1.2160.413
12-0.026-2.0120.985-1.537
13-2.7621.262-2.467-1.146
141.135-0.79-2.142-1.146
150.258-1.0480.743-1.374
16-0.138-1.3530.95-1.253
17-0.8781.176-2.189-1.464
180.962-1.129-0.3-1.146
19-0.322-0.083-0.150.402
200.62-1.3120.395-0.945
21-1.7621.168-1.048-1.332
220.743-0.107-1.235-0.345
Standard thresholds
P-value Threshold
0.001 2.81451
0.0005 3.94301
0.0001 6.31491