MotifZN527.H12INVIVO.0.P.C
Gene (human)ZNF527
(GeneCards)
Gene synonyms (human)KIAA1829
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length18
ConsensusYYKCKGTTKCWKSCvhYb
GC content54.19%
Information content (bits; total / per base)14.505 / 0.806
Data sourcesChIP-Seq
Aligned words122

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (2) 0.891 0.891 0.858 0.858 0.915 0.915 6.021 6.021 26.602 26.602
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.144
HGNCHGNC:29385
MGI
EntrezGene (human)GeneID:84503
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN527_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8NB42
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
016.025.013.078.0
028.036.012.066.0
036.015.031.070.0
049.0105.04.04.0
053.010.021.088.0
062.09.0108.03.0
076.01.00.0115.0
080.051.00.071.0
0922.02.073.025.0
1011.0107.01.03.0
1115.010.09.088.0
122.07.056.057.0
1326.028.065.03.0
140.0105.05.012.0
1561.021.029.011.0
1657.042.08.015.0
173.075.04.040.0
189.091.011.011.0
PFM
ACGT
010.0490.2050.1070.639
020.0660.2950.0980.541
030.0490.1230.2540.574
040.0740.8610.0330.033
050.0250.0820.1720.721
060.0160.0740.8850.025
070.0490.0080.00.943
080.00.4180.00.582
090.180.0160.5980.205
100.090.8770.0080.025
110.1230.0820.0740.721
120.0160.0570.4590.467
130.2130.230.5330.025
140.00.8610.0410.098
150.50.1720.2380.09
160.4670.3440.0660.123
170.0250.6150.0330.328
180.0740.7460.090.09
PWM
ACGT
01-1.482-0.191-0.8030.916
02-1.2370.16-0.8760.751
03-1.482-0.6710.0160.809
04-1.1341.209-1.807-1.807
05-2.021-1.04-0.3561.035
06-2.293-1.1341.237-2.021
07-1.482-2.667-3.2731.299
08-3.2730.499-3.2730.823
09-0.312-2.2930.85-0.191
10-0.9551.228-2.667-2.021
11-0.671-1.04-1.1341.035
12-2.293-1.3520.590.608
13-0.153-0.0820.736-2.021
14-3.2731.209-1.632-0.876
150.674-0.356-0.048-0.955
160.6080.31-1.237-0.671
17-2.0210.877-1.8070.262
18-1.1341.068-0.955-0.955
Standard thresholds
P-value Threshold
0.001 3.86776
0.0005 4.83836
0.0001 6.88216