MotifZN519.H12INVIVO.0.P.C
Gene (human)ZNF519
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length20
ConsensusGSYRCvRCYGChGCCKCCCv
GC content83.08%
Information content (bits; total / per base)21.172 / 1.059
Data sourcesChIP-Seq
Aligned words979

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (2) 0.91 0.911 0.798 0.799 0.931 0.931 6.329 6.349 412.177 416.469
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyUnclassified {2.3.4.0} (TFClass)
TFClass IDTFClass: 2.3.4.0.68
HGNCHGNC:30574
MGI
EntrezGene (human)GeneID:162655
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN519_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8TB69
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0157.043.0845.034.0
0256.0611.0290.022.0
0332.0695.062.0190.0
04136.058.0717.068.0
0523.0882.051.023.0
06257.0439.0156.0127.0
0782.063.0776.058.0
0821.0909.024.025.0
0949.0463.097.0370.0
1043.040.0823.073.0
113.0963.05.08.0
12333.0457.054.0135.0
1322.028.0871.058.0
142.0959.08.010.0
154.0734.05.0236.0
1671.04.0744.0160.0
170.0964.07.08.0
185.0935.08.031.0
1938.0787.0127.027.0
20325.0338.0226.090.0
PFM
ACGT
010.0580.0440.8630.035
020.0570.6240.2960.022
030.0330.710.0630.194
040.1390.0590.7320.069
050.0230.9010.0520.023
060.2630.4480.1590.13
070.0840.0640.7930.059
080.0210.9280.0250.026
090.050.4730.0990.378
100.0440.0410.8410.075
110.0030.9840.0050.008
120.340.4670.0550.138
130.0220.0290.890.059
140.0020.980.0080.01
150.0040.750.0050.241
160.0730.0040.760.163
170.00.9850.0070.008
180.0050.9550.0080.032
190.0390.8040.130.028
200.3320.3450.2310.092
PWM
ACGT
01-1.434-1.7071.234-1.931
02-1.4520.9110.169-2.341
03-1.9891.039-1.353-0.251
04-0.582-1.4181.07-1.263
05-2.31.277-1.542-2.3
060.0490.581-0.446-0.65
07-1.08-1.3371.149-1.418
08-2.3841.307-2.26-2.222
09-1.5810.634-0.9150.411
10-1.707-1.7761.208-1.193
11-3.9551.365-3.602-3.233
120.3060.621-1.487-0.589
13-2.341-2.1151.264-1.418
14-4.1931.36-3.233-3.046
15-3.7631.094-3.602-0.036
16-1.221-3.7631.107-0.421
17-4.9641.366-3.341-3.233
18-3.6021.335-3.233-2.019
19-1.8251.163-0.65-2.15
200.2820.321-0.079-0.988
Standard thresholds
P-value Threshold
0.001 0.20356
0.0005 1.59556
0.0001 4.55381