Motif | ZN510.H12INVIVO.1.P.C |
Gene (human) | ZNF510 (GeneCards) |
Gene synonyms (human) | KIAA0972 |
Gene (mouse) | |
Gene synonyms (mouse) | |
LOGO | |
LOGO (reverse complement) | |
Motif subtype | 1 |
Quality | C |
Motif | ZN510.H12INVIVO.1.P.C |
Gene (human) | ZNF510 (GeneCards) |
Gene synonyms (human) | KIAA0972 |
Gene (mouse) | |
Gene synonyms (mouse) | |
LOGO | |
LOGO (reverse complement) | |
Motif subtype | 1 |
Quality | C |
Motif length | 11 |
Consensus | RRYTYCYWCWY |
GC content | 49.52% |
Information content (bits; total / per base) | 10.102 / 0.918 |
Data sources | ChIP-Seq |
Aligned words | 418 |
ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
---|---|---|---|---|---|---|---|---|---|---|---|
Human | 1 (6) | 0.581 | 0.749 | 0.499 | 0.68 | 0.615 | 0.761 | 2.009 | 3.04 | 54.81 | 83.337 |
TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
TF class | C2H2 zinc finger factors {2.3} (TFClass) |
TF family | Multiple dispersed zinc fingers {2.3.4} (TFClass) |
TF subfamily | ZNF37A-like {2.3.4.25} (TFClass) |
TFClass ID | TFClass: 2.3.4.25.6 |
HGNC | HGNC:29161 |
MGI | |
EntrezGene (human) | GeneID:22869 (SSTAR profile) |
EntrezGene (mouse) | |
UniProt ID (human) | ZN510_HUMAN |
UniProt ID (mouse) | |
UniProt AC (human) | Q9Y2H8 (TFClass) |
UniProt AC (mouse) | |
GRECO-DB-TF | yes |
ChIP-Seq | 1 human, 0 mouse |
HT-SELEX | 0 |
Methyl-HT-SELEX | 0 |
PCM | ZN510.H12INVIVO.1.P.C.pcm |
PWM | ZN510.H12INVIVO.1.P.C.pwm |
PFM | ZN510.H12INVIVO.1.P.C.pfm |
Alignment | ZN510.H12INVIVO.1.P.C.words.tsv |
Threshold to P-value map | ZN510.H12INVIVO.1.P.C.thr |
Motif in other formats | |
JASPAR format | ZN510.H12INVIVO.1.P.C_jaspar_format.txt |
MEME format | ZN510.H12INVIVO.1.P.C_meme_format.meme |
Transfac format | ZN510.H12INVIVO.1.P.C_transfac_format.txt |
Homer format |
A | C | G | T | |
---|---|---|---|---|
01 | 189.0 | 3.0 | 193.0 | 33.0 |
02 | 63.0 | 37.0 | 304.0 | 14.0 |
03 | 82.0 | 92.0 | 9.0 | 235.0 |
04 | 6.0 | 30.0 | 29.0 | 353.0 |
05 | 16.0 | 185.0 | 19.0 | 198.0 |
06 | 6.0 | 404.0 | 2.0 | 6.0 |
07 | 29.0 | 308.0 | 17.0 | 64.0 |
08 | 58.0 | 16.0 | 19.0 | 325.0 |
09 | 1.0 | 404.0 | 7.0 | 6.0 |
10 | 226.0 | 31.0 | 8.0 | 153.0 |
11 | 11.0 | 134.0 | 26.0 | 247.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.452 | 0.007 | 0.462 | 0.079 |
02 | 0.151 | 0.089 | 0.727 | 0.033 |
03 | 0.196 | 0.22 | 0.022 | 0.562 |
04 | 0.014 | 0.072 | 0.069 | 0.844 |
05 | 0.038 | 0.443 | 0.045 | 0.474 |
06 | 0.014 | 0.967 | 0.005 | 0.014 |
07 | 0.069 | 0.737 | 0.041 | 0.153 |
08 | 0.139 | 0.038 | 0.045 | 0.778 |
09 | 0.002 | 0.967 | 0.017 | 0.014 |
10 | 0.541 | 0.074 | 0.019 | 0.366 |
11 | 0.026 | 0.321 | 0.062 | 0.591 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.586 | -3.157 | 0.607 | -1.122 |
02 | -0.497 | -1.013 | 1.058 | -1.922 |
03 | -0.239 | -0.125 | -2.311 | 0.802 |
04 | -2.647 | -1.213 | -1.246 | 1.207 |
05 | -1.801 | 0.565 | -1.643 | 0.632 |
06 | -2.647 | 1.342 | -3.408 | -2.647 |
07 | -1.246 | 1.071 | -1.745 | -0.481 |
08 | -0.577 | -1.801 | -1.643 | 1.125 |
09 | -3.744 | 1.342 | -2.522 | -2.647 |
10 | 0.764 | -1.182 | -2.411 | 0.377 |
11 | -2.137 | 0.246 | -1.349 | 0.852 |
P-value | Threshold |
---|---|
0.001 | 4.76279 |
0.0005 | 5.56799 |
0.0001 | 7.29785 |