MotifZN506.H12INVIVO.0.P.C
Gene (human)ZNF506
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusYbTGGGGGCTCvYMCvbSdhhhb
GC content61.15%
Information content (bits; total / per base)18.95 / 0.824
Data sourcesChIP-Seq
Aligned words962

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.974 0.975 0.951 0.959 0.978 0.979 7.638 7.683 747.567 766.658
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.64
HGNCHGNC:23780
MGI
EntrezGene (human)GeneID:440515
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN506_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q5JVG8
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0197.0149.0135.0581.0
0267.0292.0212.0391.0
0334.040.019.0869.0
0443.010.0874.035.0
0526.02.0912.022.0
0629.03.0868.062.0
0727.03.0924.08.0
0810.04.0947.01.0
091.0958.03.00.0
100.07.00.0955.0
1160.0791.027.084.0
12390.0211.0338.023.0
1330.0342.0126.0464.0
14304.0510.052.096.0
1565.0797.031.069.0
16339.0309.0166.0148.0
17109.0130.0465.0258.0
18109.0191.0597.065.0
19472.0117.0121.0252.0
20181.0351.088.0342.0
21307.0346.0122.0187.0
22155.0231.0138.0438.0
23134.0397.0173.0258.0
PFM
ACGT
010.1010.1550.140.604
020.070.3040.220.406
030.0350.0420.020.903
040.0450.010.9090.036
050.0270.0020.9480.023
060.030.0030.9020.064
070.0280.0030.960.008
080.010.0040.9840.001
090.0010.9960.0030.0
100.00.0070.00.993
110.0620.8220.0280.087
120.4050.2190.3510.024
130.0310.3560.1310.482
140.3160.530.0540.1
150.0680.8280.0320.072
160.3520.3210.1730.154
170.1130.1350.4830.268
180.1130.1990.6210.068
190.4910.1220.1260.262
200.1880.3650.0910.356
210.3190.360.1270.194
220.1610.240.1430.455
230.1390.4130.180.268
PWM
ACGT
01-0.898-0.474-0.5720.878
02-1.260.193-0.1250.483
03-1.914-1.759-2.4591.279
04-1.689-3.0291.285-1.887
05-2.168-4.1771.328-2.324
06-2.065-3.9391.278-1.335
07-2.132-3.9391.341-3.216
08-3.029-3.7461.365-4.49
09-4.491.377-3.939-4.949
10-4.949-3.325-4.9491.374
11-1.3671.186-2.132-1.039
120.481-0.130.338-2.282
13-2.0330.35-0.640.654
140.2330.748-1.506-0.908
15-1.2891.193-2.002-1.231
160.3410.249-0.368-0.481
17-0.783-0.6090.6560.07
18-0.783-0.2290.905-1.289
190.671-0.713-0.680.046
20-0.2820.376-0.9930.35
210.2430.362-0.672-0.25
22-0.435-0.04-0.550.596
23-0.5790.498-0.3270.07
Standard thresholds
P-value Threshold
0.001 1.01131
0.0005 2.38516
0.0001 5.27696