MotifZN492.H12INVITRO.0.P.D
Gene (human)ZNF492
(GeneCards)
Gene synonyms (human)KIAA1473, ZNF115
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length20
ConsensusGARMAMbAAAARGGMWnnnd
GC content40.14%
Information content (bits; total / per base)19.159 / 0.958
Data sourcesChIP-Seq
Aligned words290

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (2) 0.959 0.959 0.943 0.943 0.965 0.965 6.911 6.911 171.398 171.398
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF98-like {2.3.3.60} (TFClass)
TFClass IDTFClass: 2.3.3.60.2
HGNCHGNC:23707
MGI
EntrezGene (human)GeneID:57615
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN492_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9P255
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0169.01.0220.00.0
02279.03.01.07.0
0393.017.0180.00.0
0450.0192.036.012.0
05276.00.011.03.0
06174.079.036.01.0
0739.0119.055.077.0
08282.03.02.03.0
09252.07.027.04.0
10287.01.02.00.0
11289.00.01.00.0
12209.06.062.013.0
133.00.0287.00.0
1415.02.0264.09.0
1580.0164.010.036.0
16181.036.012.061.0
1798.051.078.063.0
18101.055.055.079.0
1981.049.084.076.0
20113.045.075.057.0
PFM
ACGT
010.2380.0030.7590.0
020.9620.010.0030.024
030.3210.0590.6210.0
040.1720.6620.1240.041
050.9520.00.0380.01
060.60.2720.1240.003
070.1340.410.190.266
080.9720.010.0070.01
090.8690.0240.0930.014
100.990.0030.0070.0
110.9970.00.0030.0
120.7210.0210.2140.045
130.010.00.990.0
140.0520.0070.910.031
150.2760.5660.0340.124
160.6240.1240.0410.21
170.3380.1760.2690.217
180.3480.190.190.272
190.2790.1690.290.262
200.390.1550.2590.197
PWM
ACGT
01-0.049-3.421.097-3.954
021.333-2.817-3.42-2.173
030.245-1.390.898-3.954
04-0.3630.962-0.681-1.706
051.323-3.954-1.784-2.817
060.8640.084-0.681-3.42
07-0.6040.488-0.270.059
081.344-2.817-3.074-2.817
091.232-2.173-0.956-2.613
101.361-3.42-3.074-3.954
111.368-3.954-3.42-3.954
121.046-2.299-0.153-1.635
13-2.817-3.9541.361-3.954
14-1.505-3.0741.278-1.959
150.0970.806-1.868-0.681
160.903-0.681-1.706-0.169
170.296-0.3440.072-0.138
180.326-0.27-0.270.084
190.109-0.3830.1450.046
200.437-0.4650.033-0.235
Standard thresholds
P-value Threshold
0.001 1.08971
0.0005 2.45686
0.0001 5.34286