MotifZN483.H12INVIVO.0.P.C
Gene (human)ZNF483
(GeneCards)
Gene synonyms (human)KIAA1962, ZKSCAN16
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length18
ConsensusdvWGRGAGCTGCARnnnM
GC content60.85%
Information content (bits; total / per base)18.724 / 1.04
Data sourcesChIP-Seq
Aligned words575

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.966 0.986 0.958 0.972 0.965 0.988 7.042 7.426 372.347 387.066
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.101
HGNCHGNC:23384
MGI
EntrezGene (human)GeneID:158399
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN483_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8TF39
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01173.056.0210.0136.0
0271.0278.0196.030.0
03438.042.038.057.0
049.07.0553.06.0
05255.02.0302.016.0
0612.05.0555.03.0
07572.00.02.01.0
085.00.0570.00.0
093.0567.02.03.0
1011.016.01.0547.0
1187.09.0473.06.0
121.0539.07.028.0
13522.021.018.014.0
1468.042.0439.026.0
1585.0118.0204.0168.0
16166.0155.0139.0115.0
17149.0192.0116.0118.0
1897.0372.052.054.0
PFM
ACGT
010.3010.0970.3650.237
020.1230.4830.3410.052
030.7620.0730.0660.099
040.0160.0120.9620.01
050.4430.0030.5250.028
060.0210.0090.9650.005
070.9950.00.0030.002
080.0090.00.9910.0
090.0050.9860.0030.005
100.0190.0280.0020.951
110.1510.0160.8230.01
120.0020.9370.0120.049
130.9080.0370.0310.024
140.1180.0730.7630.045
150.1480.2050.3550.292
160.2890.270.2420.2
170.2590.3340.2020.205
180.1690.6470.090.094
PWM
ACGT
010.183-0.9260.376-0.055
02-0.6940.6540.307-1.526
031.107-1.204-1.301-0.909
04-2.619-2.8291.339-2.952
050.568-3.7010.737-2.112
06-2.37-3.0941.343-3.455
071.373-4.516-3.701-4.028
08-3.094-4.5161.369-4.516
09-3.4551.364-3.701-3.455
10-2.446-2.112-4.0281.328
11-0.495-2.6191.183-2.952
12-4.0281.314-2.829-1.592
131.282-1.862-2.004-2.233
14-0.736-1.2041.109-1.662
15-0.518-0.1950.3470.154
160.1420.075-0.033-0.22
170.0350.287-0.212-0.195
18-0.3880.944-0.998-0.961
Standard thresholds
P-value Threshold
0.001 1.01496
0.0005 2.39296
0.0001 5.30001