MotifZN468.H12INVIVO.0.P.C
Gene (human)ZNF468
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length13
ConsensusvdGGGAGGGGGYG
GC content76.28%
Information content (bits; total / per base)16.996 / 1.307
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (2) 0.917 0.917 0.815 0.816 0.95 0.951 4.729 4.765 310.657 314.201
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF525-like {2.3.3.27} (TFClass)
TFClass IDTFClass: 2.3.3.27.4
HGNCHGNC:33105
MGI
EntrezGene (human)GeneID:90333
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN468_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q5VIY5
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01398.0201.0273.0128.0
02333.092.0406.0169.0
0373.013.0900.014.0
0415.06.0952.027.0
056.03.0990.01.0
06980.08.04.08.0
074.01.0995.00.0
082.01.0995.02.0
09111.013.0874.02.0
1010.00.0986.04.0
1174.076.0845.05.0
12156.0421.014.0409.0
1341.028.0820.0111.0
PFM
ACGT
010.3980.2010.2730.128
020.3330.0920.4060.169
030.0730.0130.90.014
040.0150.0060.9520.027
050.0060.0030.990.001
060.980.0080.0040.008
070.0040.0010.9950.0
080.0020.0010.9950.002
090.1110.0130.8740.002
100.010.00.9860.004
110.0740.0760.8450.005
120.1560.4210.0140.409
130.0410.0280.820.111
PWM
ACGT
010.462-0.2160.087-0.663
020.285-0.9880.482-0.388
03-1.215-2.8391.276-2.773
04-2.711-3.4841.332-2.171
05-3.484-3.9751.371-4.525
061.361-3.253-3.783-3.253
07-3.783-4.5251.376-4.982
08-4.213-4.5251.376-4.213
09-0.803-2.8391.247-4.213
10-3.066-4.9821.367-3.783
11-1.201-1.1751.213-3.622
12-0.4670.518-2.7730.49
13-1.774-2.1361.183-0.803
Standard thresholds
P-value Threshold
0.001 1.31201
0.0005 2.72646
0.0001 5.686685