| Motif | ZN468.H12INVITRO.0.P.D |
| Gene (human) | ZNF468 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZN468.H12INVITRO.0.P.D |
| Gene (human) | ZNF468 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 13 |
| Consensus | vdGGGAGGGGGYG |
| GC content | 76.28% |
| Information content (bits; total / per base) | 16.996 / 1.307 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (2) | 0.917 | 0.917 | 0.815 | 0.816 | 0.95 | 0.951 | 4.729 | 4.765 | 310.657 | 314.201 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF525-like {2.3.3.27} (TFClass) |
| TFClass ID | TFClass: 2.3.3.27.4 |
| HGNC | HGNC:33105 |
| MGI | |
| EntrezGene (human) | GeneID:90333 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN468_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q5VIY5 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN468.H12INVITRO.0.P.D.pcm |
| PWM | ZN468.H12INVITRO.0.P.D.pwm |
| PFM | ZN468.H12INVITRO.0.P.D.pfm |
| Alignment | ZN468.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | ZN468.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN468.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | ZN468.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | ZN468.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 398.0 | 201.0 | 273.0 | 128.0 |
| 02 | 333.0 | 92.0 | 406.0 | 169.0 |
| 03 | 73.0 | 13.0 | 900.0 | 14.0 |
| 04 | 15.0 | 6.0 | 952.0 | 27.0 |
| 05 | 6.0 | 3.0 | 990.0 | 1.0 |
| 06 | 980.0 | 8.0 | 4.0 | 8.0 |
| 07 | 4.0 | 1.0 | 995.0 | 0.0 |
| 08 | 2.0 | 1.0 | 995.0 | 2.0 |
| 09 | 111.0 | 13.0 | 874.0 | 2.0 |
| 10 | 10.0 | 0.0 | 986.0 | 4.0 |
| 11 | 74.0 | 76.0 | 845.0 | 5.0 |
| 12 | 156.0 | 421.0 | 14.0 | 409.0 |
| 13 | 41.0 | 28.0 | 820.0 | 111.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.398 | 0.201 | 0.273 | 0.128 |
| 02 | 0.333 | 0.092 | 0.406 | 0.169 |
| 03 | 0.073 | 0.013 | 0.9 | 0.014 |
| 04 | 0.015 | 0.006 | 0.952 | 0.027 |
| 05 | 0.006 | 0.003 | 0.99 | 0.001 |
| 06 | 0.98 | 0.008 | 0.004 | 0.008 |
| 07 | 0.004 | 0.001 | 0.995 | 0.0 |
| 08 | 0.002 | 0.001 | 0.995 | 0.002 |
| 09 | 0.111 | 0.013 | 0.874 | 0.002 |
| 10 | 0.01 | 0.0 | 0.986 | 0.004 |
| 11 | 0.074 | 0.076 | 0.845 | 0.005 |
| 12 | 0.156 | 0.421 | 0.014 | 0.409 |
| 13 | 0.041 | 0.028 | 0.82 | 0.111 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.462 | -0.216 | 0.087 | -0.663 |
| 02 | 0.285 | -0.988 | 0.482 | -0.388 |
| 03 | -1.215 | -2.839 | 1.276 | -2.773 |
| 04 | -2.711 | -3.484 | 1.332 | -2.171 |
| 05 | -3.484 | -3.975 | 1.371 | -4.525 |
| 06 | 1.361 | -3.253 | -3.783 | -3.253 |
| 07 | -3.783 | -4.525 | 1.376 | -4.982 |
| 08 | -4.213 | -4.525 | 1.376 | -4.213 |
| 09 | -0.803 | -2.839 | 1.247 | -4.213 |
| 10 | -3.066 | -4.982 | 1.367 | -3.783 |
| 11 | -1.201 | -1.175 | 1.213 | -3.622 |
| 12 | -0.467 | 0.518 | -2.773 | 0.49 |
| 13 | -1.774 | -2.136 | 1.183 | -0.803 |
| P-value | Threshold |
|---|---|
| 0.001 | 1.31201 |
| 0.0005 | 2.72646 |
| 0.0001 | 5.686685 |