| Motif | ZN460.H12INVIVO.0.S.D |
| Gene (human) | ZNF460 (GeneCards) |
| Gene synonyms (human) | ZNF272 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZN460.H12INVIVO.0.S.D |
| Gene (human) | ZNF460 (GeneCards) |
| Gene synonyms (human) | ZNF272 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 13 |
| Consensus | ndbGGGGGGMRdd |
| GC content | 73.35% |
| Information content (bits; total / per base) | 12.695 / 0.977 |
| Data sources | HT-SELEX |
| Aligned words | 4229 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 1 experiments | median | 0.795 | 0.795 | 0.604 | 0.644 | 0.525 | 0.572 |
| best | 0.795 | 0.795 | 0.604 | 0.644 | 0.525 | 0.572 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF460-like {2.3.3.54} (TFClass) |
| TFClass ID | TFClass: 2.3.3.54.1 |
| HGNC | HGNC:21628 |
| MGI | |
| EntrezGene (human) | GeneID:10794 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN460_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q14592 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN460.H12INVIVO.0.S.D.pcm |
| PWM | ZN460.H12INVIVO.0.S.D.pwm |
| PFM | ZN460.H12INVIVO.0.S.D.pfm |
| Alignment | ZN460.H12INVIVO.0.S.D.words.tsv |
| Threshold to P-value map | ZN460.H12INVIVO.0.S.D.thr |
| Motif in other formats | |
| JASPAR format | ZN460.H12INVIVO.0.S.D_jaspar_format.txt |
| MEME format | ZN460.H12INVIVO.0.S.D_meme_format.meme |
| Transfac format | ZN460.H12INVIVO.0.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 878.0 | 632.0 | 1132.0 | 1587.0 |
| 02 | 920.0 | 446.0 | 1340.0 | 1523.0 |
| 03 | 465.25 | 1750.25 | 1454.25 | 559.25 |
| 04 | 135.0 | 46.0 | 4004.0 | 44.0 |
| 05 | 50.0 | 29.0 | 4078.0 | 72.0 |
| 06 | 263.0 | 0.0 | 3952.0 | 14.0 |
| 07 | 348.0 | 0.0 | 3881.0 | 0.0 |
| 08 | 0.0 | 141.0 | 4088.0 | 0.0 |
| 09 | 0.0 | 0.0 | 4229.0 | 0.0 |
| 10 | 781.0 | 2986.0 | 0.0 | 462.0 |
| 11 | 616.25 | 198.25 | 2800.25 | 614.25 |
| 12 | 513.25 | 407.25 | 1016.25 | 2292.25 |
| 13 | 644.0 | 626.0 | 1090.0 | 1869.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.208 | 0.149 | 0.268 | 0.375 |
| 02 | 0.218 | 0.105 | 0.317 | 0.36 |
| 03 | 0.11 | 0.414 | 0.344 | 0.132 |
| 04 | 0.032 | 0.011 | 0.947 | 0.01 |
| 05 | 0.012 | 0.007 | 0.964 | 0.017 |
| 06 | 0.062 | 0.0 | 0.934 | 0.003 |
| 07 | 0.082 | 0.0 | 0.918 | 0.0 |
| 08 | 0.0 | 0.033 | 0.967 | 0.0 |
| 09 | 0.0 | 0.0 | 1.0 | 0.0 |
| 10 | 0.185 | 0.706 | 0.0 | 0.109 |
| 11 | 0.146 | 0.047 | 0.662 | 0.145 |
| 12 | 0.121 | 0.096 | 0.24 | 0.542 |
| 13 | 0.152 | 0.148 | 0.258 | 0.442 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.185 | -0.513 | 0.068 | 0.406 |
| 02 | -0.139 | -0.86 | 0.237 | 0.364 |
| 03 | -0.818 | 0.503 | 0.318 | -0.635 |
| 04 | -2.045 | -3.092 | 1.33 | -3.135 |
| 05 | -3.012 | -3.529 | 1.348 | -2.66 |
| 06 | -1.385 | -6.229 | 1.317 | -4.187 |
| 07 | -1.107 | -6.229 | 1.299 | -6.229 |
| 08 | -6.229 | -2.002 | 1.351 | -6.229 |
| 09 | -6.229 | -6.229 | 1.385 | -6.229 |
| 10 | -0.302 | 1.037 | -6.229 | -0.825 |
| 11 | -0.538 | -1.665 | 0.973 | -0.542 |
| 12 | -0.721 | -0.951 | -0.039 | 0.773 |
| 13 | -0.494 | -0.523 | 0.03 | 0.569 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.56631 |
| 0.0005 | 4.800915 |
| 0.0001 | 7.256775 |