MotifZN460.H12INVITRO.0.S.C
Gene (human)ZNF460
(GeneCards)
Gene synonyms (human)ZNF272
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length13
ConsensusndbGGGGGGMRdd
GC content73.35%
Information content (bits; total / per base)12.695 / 0.977
Data sourcesHT-SELEX
Aligned words4229

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 1 experiments median 0.795 0.795 0.604 0.644 0.525 0.572
best 0.795 0.795 0.604 0.644 0.525 0.572
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF460-like {2.3.3.54} (TFClass)
TFClass IDTFClass: 2.3.3.54.1
HGNCHGNC:21628
MGI
EntrezGene (human)GeneID:10794
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN460_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q14592
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 0
PCM
ACGT
01878.0632.01132.01587.0
02920.0446.01340.01523.0
03465.251750.251454.25559.25
04135.046.04004.044.0
0550.029.04078.072.0
06263.00.03952.014.0
07348.00.03881.00.0
080.0141.04088.00.0
090.00.04229.00.0
10781.02986.00.0462.0
11616.25198.252800.25614.25
12513.25407.251016.252292.25
13644.0626.01090.01869.0
PFM
ACGT
010.2080.1490.2680.375
020.2180.1050.3170.36
030.110.4140.3440.132
040.0320.0110.9470.01
050.0120.0070.9640.017
060.0620.00.9340.003
070.0820.00.9180.0
080.00.0330.9670.0
090.00.01.00.0
100.1850.7060.00.109
110.1460.0470.6620.145
120.1210.0960.240.542
130.1520.1480.2580.442
PWM
ACGT
01-0.185-0.5130.0680.406
02-0.139-0.860.2370.364
03-0.8180.5030.318-0.635
04-2.045-3.0921.33-3.135
05-3.012-3.5291.348-2.66
06-1.385-6.2291.317-4.187
07-1.107-6.2291.299-6.229
08-6.229-2.0021.351-6.229
09-6.229-6.2291.385-6.229
10-0.3021.037-6.229-0.825
11-0.538-1.6650.973-0.542
12-0.721-0.951-0.0390.773
13-0.494-0.5230.030.569
Standard thresholds
P-value Threshold
0.001 3.56631
0.0005 4.800915
0.0001 7.256775