MotifZN443.H12INVITRO.0.P.D
Gene (human)ZNF443
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusTAGCGGGTGTTTTTCCTTGACAC
GC content47.62%
Information content (bits; total / per base)39.397 / 1.713
Data sourcesChIP-Seq
Aligned words84

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (2) 0.866 0.866 0.872 0.872 0.862 0.862 17.309 17.309 43.208 43.208
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF442-like {2.3.3.74} (TFClass)
TFClass IDTFClass: 2.3.3.74.5
HGNCHGNC:20878
MGI
EntrezGene (human)GeneID:10224
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN443_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9Y2A4
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
010.00.00.084.0
0281.00.02.01.0
030.01.082.01.0
040.068.00.016.0
0518.03.063.00.0
062.02.080.00.0
072.00.082.00.0
081.00.00.083.0
093.00.080.01.0
100.04.01.079.0
110.00.01.083.0
120.00.018.066.0
130.01.00.083.0
140.03.00.081.0
150.084.00.00.0
160.082.00.02.0
170.00.02.082.0
180.00.02.082.0
190.02.082.00.0
2072.01.011.00.0
211.082.00.01.0
2282.01.00.01.0
231.079.01.03.0
PFM
ACGT
010.00.00.01.0
020.9640.00.0240.012
030.00.0120.9760.012
040.00.810.00.19
050.2140.0360.750.0
060.0240.0240.9520.0
070.0240.00.9760.0
080.0120.00.00.988
090.0360.00.9520.012
100.00.0480.0120.94
110.00.00.0120.988
120.00.00.2140.786
130.00.0120.00.988
140.00.0360.00.964
150.01.00.00.0
160.00.9760.00.024
170.00.00.0240.976
180.00.00.0240.976
190.00.0240.9760.0
200.8570.0120.1310.0
210.0120.9760.00.012
220.9760.0120.00.012
230.0120.940.0120.036
PWM
ACGT
01-2.994-2.994-2.9941.348
021.312-2.994-1.962-2.35
03-2.994-2.351.324-2.35
04-2.9941.14-2.994-0.256
05-0.146-1.6831.065-2.994
06-1.962-1.9621.3-2.994
07-1.962-2.9941.324-2.994
08-2.35-2.994-2.9941.336
09-1.683-2.9941.3-2.35
10-2.994-1.465-2.351.287
11-2.994-2.994-2.351.336
12-2.994-2.994-0.1461.11
13-2.994-2.35-2.9941.336
14-2.994-1.683-2.9941.312
15-2.9941.348-2.994-2.994
16-2.9941.324-2.994-1.962
17-2.994-2.994-1.9621.324
18-2.994-2.994-1.9621.324
19-2.994-1.9621.324-2.994
201.196-2.35-0.602-2.994
21-2.351.324-2.994-2.35
221.324-2.35-2.994-2.35
23-2.351.287-2.35-1.683
Standard thresholds
P-value Threshold
0.001 -8.12844
0.0005 -6.31079
0.0001 -2.39859