| Motif | ZN441.H12INVITRO.0.P.D |
| Gene (human) | ZNF441 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZN441.H12INVITRO.0.P.D |
| Gene (human) | ZNF441 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 10 |
| Consensus | RSSCGGAKYb |
| GC content | 67.79% |
| Information content (bits; total / per base) | 10.737 / 1.074 |
| Data sources | ChIP-Seq |
| Aligned words | 281 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (4) | 0.919 | 0.93 | 0.788 | 0.817 | 0.928 | 0.93 | 3.245 | 3.261 | 280.92 | 297.921 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.221 |
| HGNC | HGNC:20875 |
| MGI | |
| EntrezGene (human) | GeneID:126068 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN441_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q8N8Z8 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN441.H12INVITRO.0.P.D.pcm |
| PWM | ZN441.H12INVITRO.0.P.D.pwm |
| PFM | ZN441.H12INVITRO.0.P.D.pfm |
| Alignment | ZN441.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | ZN441.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN441.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | ZN441.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | ZN441.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 73.0 | 24.0 | 170.0 | 14.0 |
| 02 | 52.0 | 54.0 | 163.0 | 12.0 |
| 03 | 37.0 | 44.0 | 182.0 | 18.0 |
| 04 | 4.0 | 259.0 | 1.0 | 17.0 |
| 05 | 1.0 | 0.0 | 278.0 | 2.0 |
| 06 | 0.0 | 0.0 | 281.0 | 0.0 |
| 07 | 276.0 | 1.0 | 2.0 | 2.0 |
| 08 | 18.0 | 0.0 | 185.0 | 78.0 |
| 09 | 8.0 | 104.0 | 3.0 | 166.0 |
| 10 | 19.0 | 118.0 | 36.0 | 108.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.26 | 0.085 | 0.605 | 0.05 |
| 02 | 0.185 | 0.192 | 0.58 | 0.043 |
| 03 | 0.132 | 0.157 | 0.648 | 0.064 |
| 04 | 0.014 | 0.922 | 0.004 | 0.06 |
| 05 | 0.004 | 0.0 | 0.989 | 0.007 |
| 06 | 0.0 | 0.0 | 1.0 | 0.0 |
| 07 | 0.982 | 0.004 | 0.007 | 0.007 |
| 08 | 0.064 | 0.0 | 0.658 | 0.278 |
| 09 | 0.028 | 0.37 | 0.011 | 0.591 |
| 10 | 0.068 | 0.42 | 0.128 | 0.384 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.038 | -1.037 | 0.872 | -1.537 |
| 02 | -0.294 | -0.257 | 0.83 | -1.676 |
| 03 | -0.624 | -0.456 | 0.94 | -1.306 |
| 04 | -2.584 | 1.29 | -3.392 | -1.359 |
| 05 | -3.392 | -3.929 | 1.361 | -3.045 |
| 06 | -3.929 | -3.929 | 1.371 | -3.929 |
| 07 | 1.354 | -3.392 | -3.045 | -3.045 |
| 08 | -1.306 | -3.929 | 0.956 | 0.103 |
| 09 | -2.03 | 0.386 | -2.788 | 0.849 |
| 10 | -1.256 | 0.511 | -0.65 | 0.423 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.654235 |
| 0.0005 | 5.634095 |
| 0.0001 | 7.50625 |