MotifZN441.H12INVITRO.0.P.D
Gene (human)ZNF441
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length10
ConsensusRSSCGGAKYb
GC content67.79%
Information content (bits; total / per base)10.737 / 1.074
Data sourcesChIP-Seq
Aligned words281

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.919 0.93 0.788 0.817 0.928 0.93 3.245 3.261 280.92 297.921
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.221
HGNCHGNC:20875
MGI
EntrezGene (human)GeneID:126068
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN441_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8N8Z8
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0173.024.0170.014.0
0252.054.0163.012.0
0337.044.0182.018.0
044.0259.01.017.0
051.00.0278.02.0
060.00.0281.00.0
07276.01.02.02.0
0818.00.0185.078.0
098.0104.03.0166.0
1019.0118.036.0108.0
PFM
ACGT
010.260.0850.6050.05
020.1850.1920.580.043
030.1320.1570.6480.064
040.0140.9220.0040.06
050.0040.00.9890.007
060.00.01.00.0
070.9820.0040.0070.007
080.0640.00.6580.278
090.0280.370.0110.591
100.0680.420.1280.384
PWM
ACGT
010.038-1.0370.872-1.537
02-0.294-0.2570.83-1.676
03-0.624-0.4560.94-1.306
04-2.5841.29-3.392-1.359
05-3.392-3.9291.361-3.045
06-3.929-3.9291.371-3.929
071.354-3.392-3.045-3.045
08-1.306-3.9290.9560.103
09-2.030.386-2.7880.849
10-1.2560.511-0.650.423
Standard thresholds
P-value Threshold
0.001 4.654235
0.0005 5.634095
0.0001 7.50625