MotifZN436.H12INVITRO.0.P.D
Gene (human)ZNF436
(GeneCards)
Gene synonyms (human)KIAA1710
Gene (mouse)Znf436
Gene synonyms (mouse)Kiaa1710, Mlz-4, Zfp46
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusGGARGRCTTCCTGGAGGAGGhGd
GC content63.53%
Information content (bits; total / per base)30.74 / 1.337
Data sourcesChIP-Seq
Aligned words976

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.96 0.979 0.965 0.98 0.959 0.981 13.819 14.18 703.854 925.319
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF180-like {2.3.3.58} (TFClass)
TFClass IDTFClass: 2.3.3.58.3
HGNCHGNC:20814
MGIMGI:99192
EntrezGene (human)GeneID:80818
(SSTAR profile)
EntrezGene (mouse)GeneID:22704
(SSTAR profile)
UniProt ID (human)ZN436_HUMAN
UniProt ID (mouse)ZN436_MOUSE
UniProt AC (human)Q9C0F3
(TFClass)
UniProt AC (mouse)Q8BPP0
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0199.016.0840.021.0
0232.02.0939.03.0
03815.055.066.040.0
04489.013.0454.020.0
0537.04.0924.011.0
06159.063.0733.021.0
071.0975.00.00.0
0818.033.07.0918.0
0910.056.083.0827.0
100.0954.04.018.0
1158.0827.08.083.0
1235.099.015.0827.0
1348.01.0896.031.0
1438.012.0910.016.0
15918.08.024.026.0
16115.01.0858.02.0
178.02.0963.03.0
18886.029.014.047.0
19134.03.0839.00.0
2020.06.0937.013.0
21155.0184.086.0551.0
22165.024.0774.013.0
23363.056.0465.092.0
PFM
ACGT
010.1010.0160.8610.022
020.0330.0020.9620.003
030.8350.0560.0680.041
040.5010.0130.4650.02
050.0380.0040.9470.011
060.1630.0650.7510.022
070.0010.9990.00.0
080.0180.0340.0070.941
090.010.0570.0850.847
100.00.9770.0040.018
110.0590.8470.0080.085
120.0360.1010.0150.847
130.0490.0010.9180.032
140.0390.0120.9320.016
150.9410.0080.0250.027
160.1180.0010.8790.002
170.0080.0020.9870.003
180.9080.030.0140.048
190.1370.0030.860.0
200.020.0060.960.013
210.1590.1890.0880.565
220.1690.0250.7930.013
230.3720.0570.4760.094
PWM
ACGT
01-0.892-2.6291.231-2.381
02-1.986-4.191.342-3.952
031.201-1.466-1.289-1.773
040.692-2.8150.618-2.426
05-1.848-3.761.326-2.961
06-0.425-1.3341.095-2.381
07-4.5031.38-4.961-4.961
08-2.523-1.957-3.3381.32
09-3.043-1.449-1.0651.216
10-4.9611.358-3.76-2.523
11-1.4151.216-3.23-1.065
12-1.901-0.892-2.6881.216
13-1.598-4.5031.296-2.016
14-1.822-2.8851.311-2.629
151.32-3.23-2.257-2.182
16-0.744-4.5031.252-4.19
17-3.23-4.191.368-3.952
181.284-2.079-2.749-1.618
19-0.594-3.9521.23-4.961
20-2.426-3.461.34-2.815
21-0.45-0.28-1.030.811
22-0.388-2.2571.15-2.815
230.395-1.4490.642-0.964
Standard thresholds
P-value Threshold
0.001 -6.40139
0.0005 -4.58279
0.0001 -0.68969