MotifZN433.H12INVITRO.1.P.D
Gene (human)ZNF433
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length31
ConsensusTWdYWvRRKWAYYASWGYRGTCvTKWKRWKR
GC content45.01%
Information content (bits; total / per base)26.327 / 0.849
Data sourcesChIP-Seq
Aligned words458

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.925 0.929 0.905 0.91 0.9 0.904 8.635 8.728 336.623 342.328
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.224
HGNCHGNC:20811
MGI
EntrezGene (human)GeneID:163059
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN433_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8N7K0
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0123.033.029.0373.0
02153.021.042.0242.0
03168.041.0202.047.0
0423.0288.021.0126.0
05152.030.031.0245.0
0643.0148.0237.030.0
07193.02.0255.08.0
08260.01.0194.03.0
0917.02.0195.0244.0
10201.014.015.0228.0
11445.03.08.02.0
123.0288.03.0164.0
135.0195.00.0258.0
14381.09.058.010.0
1532.0239.0160.027.0
16151.016.010.0281.0
1737.013.0386.022.0
1816.0185.06.0251.0
19186.00.0260.012.0
2020.01.0436.01.0
210.02.00.0456.0
223.0404.03.048.0
23186.0164.059.049.0
2420.044.08.0386.0
2518.042.0135.0263.0
26152.015.027.0264.0
2730.023.0351.054.0
2862.022.0332.042.0
29243.027.033.0155.0
3039.026.0349.044.0
31180.028.0219.031.0
PFM
ACGT
010.050.0720.0630.814
020.3340.0460.0920.528
030.3670.090.4410.103
040.050.6290.0460.275
050.3320.0660.0680.535
060.0940.3230.5170.066
070.4210.0040.5570.017
080.5680.0020.4240.007
090.0370.0040.4260.533
100.4390.0310.0330.498
110.9720.0070.0170.004
120.0070.6290.0070.358
130.0110.4260.00.563
140.8320.020.1270.022
150.070.5220.3490.059
160.330.0350.0220.614
170.0810.0280.8430.048
180.0350.4040.0130.548
190.4060.00.5680.026
200.0440.0020.9520.002
210.00.0040.00.996
220.0070.8820.0070.105
230.4060.3580.1290.107
240.0440.0960.0170.843
250.0390.0920.2950.574
260.3320.0330.0590.576
270.0660.050.7660.118
280.1350.0480.7250.092
290.5310.0590.0720.338
300.0850.0570.7620.096
310.3930.0610.4780.068
PWM
ACGT
01-1.554-1.212-1.3351.172
020.287-1.639-0.980.741
030.379-1.0040.562-0.872
04-1.5540.914-1.6390.095
050.28-1.303-1.2720.754
06-0.9580.2540.721-1.303
070.517-3.4920.793-2.499
080.813-3.8250.522-3.243
09-1.834-3.4920.5270.75
100.557-2.011-1.9490.682
111.348-3.243-2.499-3.492
12-3.2430.914-3.2430.355
13-2.8770.527-4.3270.805
141.193-2.399-0.667-2.309
15-1.2410.7290.331-1.403
160.274-1.89-2.3090.89
17-1.102-2.0781.206-1.596
18-1.890.475-2.7350.778
190.48-4.3270.813-2.149
20-1.684-3.8251.327-3.825
21-4.327-3.492-4.3271.372
22-3.2431.251-3.243-0.851
230.480.355-0.651-0.831
24-1.684-0.935-2.4991.206
25-1.782-0.980.1630.824
260.28-1.949-1.4030.828
27-1.303-1.5541.111-0.737
28-0.602-1.5961.056-0.98
290.745-1.403-1.2120.299
30-1.052-1.4391.106-0.935
310.448-1.3680.642-1.272
Standard thresholds
P-value Threshold
0.001 -2.34499
0.0005 -0.76794
0.0001 2.58601