ZN432.H12INVIVO.0.P.C motif - HOmo sapiens COmprehensive MOdel COllection

Motif	ZN432.H12INVIVO.0.P.C
Gene (human)	ZNF432 (GeneCards)
Gene synonyms (human)	KIAA0798
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype	0
Quality	C

Motif length	23
Consensus	YWMARMWvYWGYYdbKvRYKRKY
GC content	38.33%
Information content (bits; total / per base)	16.26 / 0.707
Data sources	ChIP-Seq
Aligned words	325

ChIP-Seq benchmarking	Num. of experiments (peaksets)	auROC, median	auROC, best	auPRC, median	auPRC, best	pseudo-auROC, median	pseudo-auROC, best	pseudo-log-auROC, median	pseudo-log-auROC, best	Centrality, median	Centrality, best
Human	1 (4)	0.747	0.776	0.749	0.784	0.774	0.807	8.146	9.271	65.566	72.387

TF superclass	Zinc-coordinating DNA-binding domains {2} (TFClass)
TF class	C2H2 zinc finger factors {2.3} (TFClass)
TF family	More than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamily	ZNF432-like {2.3.3.75} (TFClass)
TFClass ID	TFClass: 2.3.3.75.1
HGNC	HGNC:20810
MGI
EntrezGene (human)	GeneID:9668 (SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)	ZN432_HUMAN
UniProt ID (mouse)
UniProt AC (human)	O94892 (TFClass)
UniProt AC (mouse)
GRECO-DB-TF	yes

ChIP-Seq	1 human, 0 mouse
HT-SELEX	0
Methyl-HT-SELEX	0

PCM	ZN432.H12INVIVO.0.P.C.pcm
PWM	ZN432.H12INVIVO.0.P.C.pwm
PFM	ZN432.H12INVIVO.0.P.C.pfm
Alignment	ZN432.H12INVIVO.0.P.C.words.tsv
Threshold to P-value map	ZN432.H12INVIVO.0.P.C.thr
Motif in other formats
JASPAR format	ZN432.H12INVIVO.0.P.C_jaspar_format.txt
MEME format	ZN432.H12INVIVO.0.P.C_meme_format.meme
Transfac format	ZN432.H12INVIVO.0.P.C_transfac_format.txt
Homer format	ZN432.H12INVIVO.0.P.C_homer_format_0.001.txt ZN432.H12INVIVO.0.P.C_homer_format_0.0005.txt ZN432.H12INVIVO.0.P.C_homer_format_0.0001.txt

PCM

	A	C	G	T
01	21.0	49.0	27.0	228.0
02	47.0	28.0	27.0	223.0
03	209.0	55.0	30.0	31.0
04	266.0	14.0	25.0	20.0
05	206.0	25.0	62.0	32.0
06	34.0	239.0	19.0	33.0
07	253.0	30.0	10.0	32.0
08	148.0	62.0	75.0	40.0
09	15.0	66.0	11.0	233.0
10	33.0	18.0	19.0	255.0
11	29.0	5.0	269.0	22.0
12	4.0	247.0	18.0	56.0
13	10.0	200.0	5.0	110.0
14	83.0	19.0	101.0	122.0
15	33.0	189.0	50.0	53.0
16	21.0	34.0	58.0	212.0
17	91.0	35.0	169.0	30.0
18	246.0	19.0	43.0	17.0
19	13.0	44.0	17.0	251.0
20	13.0	15.0	47.0	250.0
21	57.0	22.0	225.0	21.0
22	15.0	30.0	31.0	249.0
23	7.0	44.0	38.0	236.0

PFM

	A	C	G	T
01	0.065	0.151	0.083	0.702
02	0.145	0.086	0.083	0.686
03	0.643	0.169	0.092	0.095
04	0.818	0.043	0.077	0.062
05	0.634	0.077	0.191	0.098
06	0.105	0.735	0.058	0.102
07	0.778	0.092	0.031	0.098
08	0.455	0.191	0.231	0.123
09	0.046	0.203	0.034	0.717
10	0.102	0.055	0.058	0.785
11	0.089	0.015	0.828	0.068
12	0.012	0.76	0.055	0.172
13	0.031	0.615	0.015	0.338
14	0.255	0.058	0.311	0.375
15	0.102	0.582	0.154	0.163
16	0.065	0.105	0.178	0.652
17	0.28	0.108	0.52	0.092
18	0.757	0.058	0.132	0.052
19	0.04	0.135	0.052	0.772
20	0.04	0.046	0.145	0.769
21	0.175	0.068	0.692	0.065
22	0.046	0.092	0.095	0.766
23	0.022	0.135	0.117	0.726

PWM

	A	C	G	T
01	-1.304	-0.494	-1.067	1.02
02	-0.535	-1.033	-1.067	0.998
03	0.934	-0.382	-0.967	-0.936
04	1.174	-1.678	-1.14	-1.35
05	0.92	-1.14	-0.265	-0.905
06	-0.847	1.067	-1.397	-0.876
07	1.124	-0.967	-1.978	-0.905
08	0.592	-0.265	-0.079	-0.691
09	-1.615	-0.204	-1.894	1.042
10	-0.876	-1.448	-1.397	1.132
11	-0.999	-2.552	1.185	-1.26
12	-2.72	1.1	-1.448	-0.364
13	-1.978	0.89	-2.552	0.298
14	0.021	-1.397	0.214	0.401
15	-0.876	0.834	-0.475	-0.418
16	-1.304	-0.847	-0.33	0.948
17	0.111	-0.819	0.723	-0.967
18	1.096	-1.397	-0.621	-1.5
19	-1.745	-0.599	-1.5	1.116
20	-1.745	-1.615	-0.535	1.112
21	-0.347	-1.26	1.007	-1.304
22	-1.615	-0.967	-0.936	1.108
23	-2.281	-0.599	-0.74	1.055

Standard thresholds

P-value	Threshold
0.001	3.30076
0.0005	4.30006
0.0001	6.44226