MotifZN430.H12INVIVO.0.P.C
Gene (human)ZNF430
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusCACRTCTTACATGGYGGCAGGCA
GC content53.83%
Information content (bits; total / per base)37.487 / 1.63
Data sourcesChIP-Seq
Aligned words897

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.964 0.971 0.962 0.969 0.961 0.968 19.174 19.423 674.97 793.027
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF100-like {2.3.3.59} (TFClass)
TFClass IDTFClass: 2.3.3.59.2
HGNCHGNC:20808
MGI
EntrezGene (human)GeneID:80264
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN430_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9H8G1
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0117.0869.06.05.0
02891.03.03.00.0
036.0719.015.0157.0
04446.06.0426.019.0
053.013.03.0878.0
066.0841.00.050.0
077.025.01.0864.0
081.045.01.0850.0
09848.046.03.00.0
104.0870.00.023.0
11891.01.04.01.0
126.025.012.0854.0
132.00.0895.00.0
140.01.0896.00.0
1521.0339.00.0537.0
16134.01.0762.00.0
170.01.0894.02.0
181.0888.01.07.0
19853.012.03.029.0
2062.01.0827.07.0
21145.013.0728.011.0
2230.0857.03.07.0
23849.01.046.01.0
PFM
ACGT
010.0190.9690.0070.006
020.9930.0030.0030.0
030.0070.8020.0170.175
040.4970.0070.4750.021
050.0030.0140.0030.979
060.0070.9380.00.056
070.0080.0280.0010.963
080.0010.050.0010.948
090.9450.0510.0030.0
100.0040.970.00.026
110.9930.0010.0040.001
120.0070.0280.0130.952
130.0020.00.9980.0
140.00.0010.9990.0
150.0230.3780.00.599
160.1490.0010.8490.0
170.00.0010.9970.002
180.0010.990.0010.008
190.9510.0130.0030.032
200.0690.0010.9220.008
210.1620.0140.8120.012
220.0330.9550.0030.008
230.9460.0010.0510.001
PWM
ACGT
01-2.4921.349-3.379-3.518
021.374-3.873-3.873-4.89
03-3.3791.16-2.605-0.353
040.684-3.3790.638-2.39
05-3.873-2.732-3.8731.359
06-3.3791.316-4.89-1.475
07-3.257-2.136-4.4271.343
08-4.427-1.577-4.4271.327
091.325-1.555-3.873-4.89
10-3.681.35-4.89-2.214
111.374-4.427-3.68-4.427
12-3.379-2.136-2.8031.332
13-4.112-4.891.378-4.89
14-4.89-4.4271.38-4.89
15-2.2980.411-4.890.869
16-0.51-4.4271.218-4.89
17-4.89-4.4271.377-4.112
18-4.4271.371-4.427-3.257
191.33-2.803-3.873-1.996
20-1.266-4.4271.3-3.257
21-0.432-2.7321.172-2.879
22-1.9641.335-3.873-3.257
231.326-4.427-1.555-4.427
Standard thresholds
P-value Threshold
0.001 -15.09759
0.0005 -12.81814
0.0001 -7.91784