MotifZN418.H12INVIVO.0.P.B
Gene (human)ZNF418
(GeneCards)
Gene synonyms (human)KIAA1956
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length18
ConsensusbTGYTTYYRGCYWCYKvb
GC content47.61%
Information content (bits; total / per base)18.177 / 1.01
Data sourcesChIP-Seq
Aligned words391

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.769 0.953 0.763 0.946 0.761 0.966 4.721 7.412 188.678 208.509
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyZNF417-like {2.3.4.1} (TFClass)
TFClass IDTFClass: 2.3.4.1.5
HGNCHGNC:20647
MGI
EntrezGene (human)GeneID:147686
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN418_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8TF45
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0120.0123.070.0178.0
025.01.06.0379.0
0315.00.0376.00.0
0410.0268.00.0113.0
053.014.01.0373.0
062.017.01.0371.0
0710.097.028.0256.0
0822.060.07.0302.0
09222.01.0155.013.0
103.05.0371.012.0
117.0330.05.049.0
122.0195.03.0191.0
1375.013.020.0283.0
1411.0361.04.015.0
1551.094.02.0244.0
1626.030.0195.0140.0
17127.092.0135.037.0
1842.0197.074.078.0
PFM
ACGT
010.0510.3150.1790.455
020.0130.0030.0150.969
030.0380.00.9620.0
040.0260.6850.00.289
050.0080.0360.0030.954
060.0050.0430.0030.949
070.0260.2480.0720.655
080.0560.1530.0180.772
090.5680.0030.3960.033
100.0080.0130.9490.031
110.0180.8440.0130.125
120.0050.4990.0080.488
130.1920.0330.0510.724
140.0280.9230.010.038
150.130.240.0050.624
160.0660.0770.4990.358
170.3250.2350.3450.095
180.1070.5040.1890.199
PWM
ACGT
01-1.530.227-0.3280.593
02-2.727-3.684-2.5841.344
03-1.795-4.1971.336-4.197
04-2.1560.999-4.1970.143
05-3.095-1.857-3.6841.328
06-3.347-1.68-3.6841.323
07-2.156-0.008-1.2130.953
08-1.441-0.479-2.4581.118
090.812-3.6840.455-1.924
10-3.095-2.7271.323-1.995
11-2.4581.206-2.727-0.676
12-3.3470.683-3.0950.662
13-0.26-1.924-1.531.053
14-2.0721.295-2.894-1.795
15-0.637-0.039-3.3470.906
16-1.284-1.1480.6830.355
170.258-0.060.319-0.947
18-0.8250.693-0.274-0.222
Standard thresholds
P-value Threshold
0.001 1.69151
0.0005 2.98401
0.0001 5.70921