MotifZN417.H12INVIVO.0.P.C
Gene (human)ZNF417
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length15
ConsensusvYWnbTGGCGCChdv
GC content63.43%
Information content (bits; total / per base)14.291 / 0.953
Data sourcesChIP-Seq
Aligned words923

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.973 0.974 0.962 0.965 0.953 0.954 5.634 5.636 556.299 585.854
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyZNF417-like {2.3.4.1} (TFClass)
TFClass IDTFClass: 2.3.4.1.1
HGNCHGNC:20646
MGI
EntrezGene (human)GeneID:147687
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN417_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8TAU3
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01222.0165.0373.0163.0
02111.0615.073.0124.0
03712.023.052.0136.0
04168.0282.0247.0226.0
0588.0185.0250.0400.0
068.012.018.0885.0
0723.01.0853.046.0
089.06.0907.01.0
096.0898.07.012.0
10105.010.0808.00.0
111.0903.010.09.0
128.0872.05.038.0
13152.0517.0115.0139.0
14498.084.0131.0210.0
15413.0154.0206.0150.0
PFM
ACGT
010.2410.1790.4040.177
020.120.6660.0790.134
030.7710.0250.0560.147
040.1820.3060.2680.245
050.0950.20.2710.433
060.0090.0130.020.959
070.0250.0010.9240.05
080.010.0070.9830.001
090.0070.9730.0080.013
100.1140.0110.8750.0
110.0010.9780.0110.01
120.0090.9450.0050.041
130.1650.560.1250.151
140.540.0910.1420.228
150.4470.1670.2230.163
PWM
ACGT
01-0.038-0.3320.477-0.345
02-0.7240.976-1.135-0.615
031.122-2.242-1.465-0.524
04-0.3150.1990.068-0.021
05-0.952-0.2190.080.547
06-3.176-2.831-2.4681.339
07-2.242-4.4531.302-1.584
08-3.078-3.4071.363-4.453
09-3.4071.353-3.285-2.831
10-0.779-2.9891.248-4.914
11-4.4531.359-2.989-3.078
12-3.1761.324-3.546-1.767
13-0.4140.803-0.689-0.502
140.765-0.998-0.561-0.094
150.579-0.401-0.113-0.427
Standard thresholds
P-value Threshold
0.001 3.16156
0.0005 4.33206
0.0001 6.74336