MotifZN383.H12INVIVO.0.P.C
Gene (human)ZNF383
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusRvRGAGSvRvRRbvbRSvRRSvv
GC content61.91%
Information content (bits; total / per base)12.758 / 0.555
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.805 0.824 0.727 0.747 0.841 0.86 4.76 5.005 140.055 145.602
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF620-like {2.3.3.35} (TFClass)
TFClass IDTFClass: 2.3.3.35.5
HGNCHGNC:18609
MGI
EntrezGene (human)GeneID:163087
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN383_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8NA42
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01175.0140.0616.069.0
02213.0454.0185.0148.0
03337.037.0511.0115.0
0427.019.0947.07.0
05899.032.050.019.0
0677.018.0866.039.0
0778.0640.0206.076.0
08304.0357.0230.0109.0
09558.0100.0297.045.0
10178.0399.0346.077.0
11547.069.0341.043.0
12605.095.0266.034.0
13128.0227.0515.0130.0
14415.0126.0349.0110.0
1581.0195.0374.0350.0
16163.091.0640.0106.0
17100.0118.0733.049.0
18535.0248.0184.033.0
19525.088.0351.036.0
20206.056.0672.066.0
2191.095.0762.052.0
22395.0176.0372.057.0
23279.096.0550.075.0
PFM
ACGT
010.1750.140.6160.069
020.2130.4540.1850.148
030.3370.0370.5110.115
040.0270.0190.9470.007
050.8990.0320.050.019
060.0770.0180.8660.039
070.0780.640.2060.076
080.3040.3570.230.109
090.5580.10.2970.045
100.1780.3990.3460.077
110.5470.0690.3410.043
120.6050.0950.2660.034
130.1280.2270.5150.13
140.4150.1260.3490.11
150.0810.1950.3740.35
160.1630.0910.640.106
170.10.1180.7330.049
180.5350.2480.1840.033
190.5250.0880.3510.036
200.2060.0560.6720.066
210.0910.0950.7620.052
220.3950.1760.3720.057
230.2790.0960.550.075
PWM
ACGT
01-0.354-0.5740.898-1.27
02-0.1590.594-0.299-0.52
030.297-1.8720.711-0.769
04-2.171-2.4971.327-3.362
051.275-2.01-1.582-2.497
06-1.162-2.5461.238-1.821
07-1.150.936-0.192-1.175
080.1940.354-0.083-0.821
090.799-0.9060.171-1.684
10-0.3370.4650.323-1.162
110.779-1.270.309-1.728
120.88-0.9560.062-1.952
13-0.663-0.0960.719-0.648
140.504-0.6780.332-0.812
15-1.113-0.2470.4010.335
16-0.424-0.9990.936-0.849
17-0.906-0.7431.071-1.602
180.757-0.008-0.304-1.981
190.738-1.0320.337-1.898
20-0.192-1.4730.984-1.313
21-0.999-0.9561.11-1.544
220.455-0.3480.395-1.455
230.109-0.9460.785-1.188
Standard thresholds
P-value Threshold
0.001 4.08771
0.0005 5.00496
0.0001 6.94301