MotifZN37A.H12INVITRO.0.P.D
Gene (human)ZNF37A
(GeneCards)
Gene synonyms (human)KOX21, ZNF37
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusGbGAGGGAGCTGGGGTATTKATM
GC content50.92%
Information content (bits; total / per base)32.506 / 1.413
Data sourcesChIP-Seq
Aligned words233

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (11) 0.741 0.856 0.739 0.858 0.783 0.886 9.388 12.787 173.222 271.495
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyZNF37A-like {2.3.4.25} (TFClass)
TFClass IDTFClass: 2.3.4.25.1
HGNCHGNC:13102
MGI
EntrezGene (human)GeneID:7587
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN37A_HUMAN
UniProt ID (mouse)
UniProt AC (human)P17032
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0118.03.0208.04.0
0234.058.048.093.0
0340.04.0183.06.0
04208.00.014.011.0
059.01.0219.04.0
0614.00.0218.01.0
078.01.0221.03.0
08232.01.00.00.0
093.02.0221.07.0
100.0199.04.030.0
118.09.010.0206.0
120.00.0233.00.0
1321.02.0205.05.0
142.00.0230.01.0
1517.01.0214.01.0
166.013.02.0212.0
17222.03.08.00.0
185.09.010.0209.0
196.03.015.0209.0
2010.03.046.0174.0
21219.02.011.01.0
222.017.04.0210.0
23157.060.014.02.0
PFM
ACGT
010.0770.0130.8930.017
020.1460.2490.2060.399
030.1720.0170.7850.026
040.8930.00.060.047
050.0390.0040.940.017
060.060.00.9360.004
070.0340.0040.9480.013
080.9960.0040.00.0
090.0130.0090.9480.03
100.00.8540.0170.129
110.0340.0390.0430.884
120.00.01.00.0
130.090.0090.880.021
140.0090.00.9870.004
150.0730.0040.9180.004
160.0260.0560.0090.91
170.9530.0130.0340.0
180.0210.0390.0430.897
190.0260.0130.0640.897
200.0430.0130.1970.747
210.940.0090.0470.004
220.0090.0730.0170.901
230.6740.2580.060.009
PWM
ACGT
01-1.125-2.6151.256-2.408
02-0.522-0.004-0.1890.459
03-0.365-2.4081.129-2.091
041.256-3.778-1.356-1.573
05-1.75-3.2281.307-2.408
06-1.356-3.7781.303-3.228
07-1.851-3.2281.316-2.615
081.365-3.228-3.778-3.778
09-2.615-2.8751.316-1.964
10-3.7781.212-2.408-0.642
11-1.851-1.75-1.6581.247
12-3.778-3.7781.369-3.778
13-0.98-2.8751.242-2.237
14-2.875-3.7781.356-3.228
15-1.178-3.2281.284-3.228
16-2.091-1.423-2.8751.275
171.321-2.615-1.851-3.778
18-2.237-1.75-1.6581.261
19-2.091-2.615-1.2931.261
20-1.658-2.615-0.231.079
211.307-2.875-1.573-3.228
22-2.875-1.178-2.4081.266
230.9770.029-1.356-2.875
Standard thresholds
P-value Threshold
0.001 -5.72194
0.0005 -3.99744
0.0001 -0.29079