MotifZN350.H12INVIVO.0.P.B
Gene (human)ZNF350
(GeneCards)
Gene synonyms (human)ZBRK1
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length18
ConsensushdKbYYTTTTWWdMYYhv
GC content37.83%
Information content (bits; total / per base)11.587 / 0.644
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.711 0.767 0.651 0.711 0.743 0.79 3.597 3.861 147.194 235.208
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF350-like {2.3.3.30} (TFClass)
TFClass IDTFClass: 2.3.3.30.1
HGNCHGNC:16656
MGI
EntrezGene (human)GeneID:59348
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN350_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9GZX5
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01267.0463.0133.0137.0
02448.055.0204.0293.0
0368.083.0595.0254.0
04120.0422.0141.0317.0
0568.0566.068.0298.0
0687.0511.019.0383.0
0716.0105.010.0869.0
080.05.06.0989.0
093.031.016.0950.0
1045.030.093.0832.0
11653.0104.083.0160.0
12113.049.0110.0728.0
13270.048.0500.0182.0
14632.0190.090.088.0
15103.0611.089.0197.0
1676.0603.0105.0216.0
17318.0229.095.0358.0
18521.0159.0189.0131.0
PFM
ACGT
010.2670.4630.1330.137
020.4480.0550.2040.293
030.0680.0830.5950.254
040.120.4220.1410.317
050.0680.5660.0680.298
060.0870.5110.0190.383
070.0160.1050.010.869
080.00.0050.0060.989
090.0030.0310.0160.95
100.0450.030.0930.832
110.6530.1040.0830.16
120.1130.0490.110.728
130.270.0480.50.182
140.6320.190.090.088
150.1030.6110.0890.197
160.0760.6030.1050.216
170.3180.2290.0950.358
180.5210.1590.1890.131
PWM
ACGT
010.0650.613-0.625-0.596
020.58-1.49-0.2020.158
03-1.284-1.0890.8630.016
04-0.7270.521-0.5670.236
05-1.2840.813-1.2840.175
06-1.0430.711-2.4970.424
07-2.653-0.858-3.0661.241
08-4.982-3.622-3.4841.37
09-3.975-2.04-2.6531.33
10-1.684-2.071-0.9771.198
110.956-0.867-1.089-0.442
12-0.786-1.602-0.8121.064
130.076-1.6220.69-0.315
140.923-0.272-1.01-1.032
15-0.8770.89-1.02-0.236
16-1.1750.876-0.858-0.145
170.239-0.087-0.9560.357
180.731-0.449-0.278-0.64
Standard thresholds
P-value Threshold
0.001 4.38241
0.0005 5.28206
0.0001 7.13621