MotifZN33B.H12INVIVO.0.P.C
Gene (human)ZNF33B
(GeneCards)
Gene synonyms (human)KOX2, ZNF11B
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length30
ConsensushvvRRRGdATTKARTdnAGGSRhWKddddd
GC content39.66%
Information content (bits; total / per base)22.129 / 0.738
Data sourcesChIP-Seq
Aligned words109

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.89 0.942 0.886 0.938 0.896 0.936 9.602 10.912 46.412 58.824
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF25-like {2.3.3.69} (TFClass)
TFClass IDTFClass: 2.3.3.69.7
HGNCHGNC:13097
MGI
EntrezGene (human)GeneID:7582
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN33B_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q06732
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0137.046.08.018.0
0247.017.030.015.0
0327.012.061.09.0
0466.06.022.015.0
0566.04.035.04.0
0634.00.073.02.0
076.03.093.07.0
0860.06.024.019.0
0996.08.01.04.0
102.01.00.0106.0
110.07.07.095.0
122.016.038.053.0
1394.02.04.09.0
1483.03.012.011.0
153.08.010.088.0
1659.010.021.019.0
175.042.031.031.0
18100.01.03.05.0
1910.00.097.02.0
202.02.0103.02.0
2110.012.083.04.0
2263.06.032.08.0
2356.023.010.020.0
2412.06.05.086.0
255.010.012.082.0
2621.010.051.027.0
2736.04.053.016.0
2825.08.031.045.0
2922.013.019.055.0
3041.09.033.026.0
PFM
ACGT
010.3390.4220.0730.165
020.4310.1560.2750.138
030.2480.110.560.083
040.6060.0550.2020.138
050.6060.0370.3210.037
060.3120.00.670.018
070.0550.0280.8530.064
080.550.0550.220.174
090.8810.0730.0090.037
100.0180.0090.00.972
110.00.0640.0640.872
120.0180.1470.3490.486
130.8620.0180.0370.083
140.7610.0280.110.101
150.0280.0730.0920.807
160.5410.0920.1930.174
170.0460.3850.2840.284
180.9170.0090.0280.046
190.0920.00.890.018
200.0180.0180.9450.018
210.0920.110.7610.037
220.5780.0550.2940.073
230.5140.2110.0920.183
240.110.0550.0460.789
250.0460.0920.110.752
260.1930.0920.4680.248
270.330.0370.4860.147
280.2290.0730.2840.413
290.2020.1190.1740.505
300.3760.0830.3030.239
PWM
ACGT
010.2950.507-1.131-0.394
020.528-0.4470.092-0.564
03-0.009-0.7690.783-1.027
040.86-1.377-0.204-0.564
050.86-1.7040.241-1.704
060.213-3.1880.959-2.193
07-1.377-1.9191.198-1.246
080.767-1.377-0.121-0.343
091.229-1.131-2.571-1.704
10-2.193-2.571-3.1881.327
11-3.188-1.246-1.2461.219
12-2.193-0.5040.3210.645
131.209-2.193-1.704-1.027
141.086-1.919-0.769-0.848
15-1.919-1.131-0.9341.143
160.75-0.934-0.248-0.343
17-1.5270.4180.1240.124
181.27-2.571-1.919-1.527
19-0.934-3.1881.24-2.193
20-2.193-2.1931.299-2.193
21-0.934-0.7691.086-1.704
220.814-1.3770.155-1.131
230.699-0.162-0.934-0.294
24-0.769-1.377-1.5271.121
25-1.527-0.934-0.7691.074
26-0.248-0.9340.607-0.009
270.268-1.7040.645-0.504
28-0.082-1.1310.1240.485
29-0.204-0.696-0.3430.681
300.395-1.0270.184-0.045
Standard thresholds
P-value Threshold
0.001 1.46756
0.0005 2.68021
0.0001 5.27486