MotifZN335.H12CORE.0.P.B
Gene (human)ZNF335
(GeneCards)
Gene synonyms (human)
Gene (mouse)Znf335
Gene synonyms (mouse)Zfp335
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length23
ConsensusbRGnYGbCYnnnvMdnYGCCTGM
GC content62.21%
Information content (bits; total / per base)17.401 / 0.757
Data sourcesChIP-Seq
Aligned words104

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (13) 0.771 0.886 0.668 0.854 0.808 0.912 4.284 6.597 12.699 20.201
Mouse 5 (33) 0.796 0.938 0.78 0.916 0.785 0.95 5.961 7.918 11.051 27.638

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 1.889 1.455 0.101 0.073
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyUnclassified {2.3.4.0} (TFClass)
TFClass IDTFClass: 2.3.4.0.2
HGNCHGNC:15807
MGIMGI:2682313
EntrezGene (human)GeneID:63925
(SSTAR profile)
EntrezGene (mouse)GeneID:329559
(SSTAR profile)
UniProt ID (human)ZN335_HUMAN
UniProt ID (mouse)ZN335_MOUSE
UniProt AC (human)Q9H4Z2
(TFClass)
UniProt AC (mouse)A2A5K6
(TFClass)
GRECO-DB-TF
no
ChIP-Seq 2 human, 5 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
019.016.051.028.0
0231.03.058.012.0
036.06.086.06.0
0414.049.027.014.0
056.021.08.069.0
067.02.082.013.0
077.029.016.052.0
080.095.01.08.0
091.071.02.030.0
1026.018.036.024.0
1122.043.022.017.0
1226.023.039.016.0
1314.019.060.011.0
1437.052.04.011.0
1526.06.038.034.0
1627.027.031.019.0
175.023.01.075.0
180.00.0100.04.0
191.0103.00.00.0
202.0101.00.01.0
211.02.04.097.0
223.01.090.010.0
2364.019.03.018.0
PFM
ACGT
010.0870.1540.490.269
020.2980.0290.5580.115
030.0580.0580.8270.058
040.1350.4710.260.135
050.0580.2020.0770.663
060.0670.0190.7880.125
070.0670.2790.1540.5
080.00.9130.010.077
090.010.6830.0190.288
100.250.1730.3460.231
110.2120.4130.2120.163
120.250.2210.3750.154
130.1350.1830.5770.106
140.3560.50.0380.106
150.250.0580.3650.327
160.260.260.2980.183
170.0480.2210.010.721
180.00.00.9620.038
190.010.990.00.0
200.0190.9710.00.01
210.010.0190.0380.933
220.0290.010.8650.096
230.6150.1830.0290.173
PWM
ACGT
01-0.983-0.4590.6530.071
020.169-1.8760.778-0.725
03-1.333-1.3331.166-1.333
04-0.5830.6130.036-0.583
05-1.333-0.203-1.0870.949
06-1.202-2.1511.119-0.651
07-1.2020.105-0.4590.672
08-3.1521.264-2.531-1.087
09-2.5310.977-2.1510.137
100.0-0.3490.313-0.076
11-0.1590.486-0.159-0.403
120.0-0.1170.391-0.459
13-0.583-0.2980.812-0.804
140.340.672-1.661-0.804
150.0-1.3330.3660.258
160.0360.0360.169-0.298
17-1.484-0.117-2.5311.031
18-3.152-3.1521.315-1.661
19-2.5311.344-3.152-3.152
20-2.1511.325-3.152-2.531
21-2.531-2.151-1.6611.285
22-1.876-2.5311.211-0.889
230.875-0.298-1.876-0.349
Standard thresholds
P-value Threshold
0.001 2.94991
0.0005 4.05771
0.0001 6.40056