MotifZN331.H12INVITRO.0.P.D
Gene (human)ZNF331
(GeneCards)
Gene synonyms (human)RITA, ZNF361, ZNF463
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusGRMWGGGCTCAGCWRGRhRRYTY
GC content62.63%
Information content (bits; total / per base)24.292 / 1.056
Data sourcesChIP-Seq
Aligned words975

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.968 0.988 0.964 0.985 0.959 0.985 12.23 13.04 670.432 821.699
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.142
HGNCHGNC:15489
MGI
EntrezGene (human)GeneID:55422
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN331_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9NQX6
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0187.013.0832.043.0
02275.062.0595.043.0
03138.0679.030.0128.0
04318.016.060.0581.0
0577.010.0859.029.0
0658.03.0829.085.0
0718.02.0948.07.0
0825.0860.06.084.0
095.021.03.0946.0
1012.0897.013.053.0
11775.011.040.0149.0
1217.01.0950.07.0
1320.0884.015.056.0
14263.068.032.0612.0
15162.019.0750.044.0
1691.023.0805.056.0
17139.062.0690.084.0
18139.0242.094.0500.0
19127.050.0703.095.0
20125.068.0739.043.0
2134.0138.0103.0700.0
2212.092.041.0830.0
2338.0622.064.0251.0
PFM
ACGT
010.0890.0130.8530.044
020.2820.0640.610.044
030.1420.6960.0310.131
040.3260.0160.0620.596
050.0790.010.8810.03
060.0590.0030.850.087
070.0180.0020.9720.007
080.0260.8820.0060.086
090.0050.0220.0030.97
100.0120.920.0130.054
110.7950.0110.0410.153
120.0170.0010.9740.007
130.0210.9070.0150.057
140.270.070.0330.628
150.1660.0190.7690.045
160.0930.0240.8260.057
170.1430.0640.7080.086
180.1430.2480.0960.513
190.130.0510.7210.097
200.1280.070.7580.044
210.0350.1420.1060.718
220.0120.0940.0420.851
230.0390.6380.0660.257
PWM
ACGT
01-1.018-2.8141.223-1.703
020.12-1.3490.888-1.703
03-0.5641.02-2.046-0.638
040.264-2.628-1.3810.865
05-1.137-3.0421.255-2.078
06-1.414-3.9511.219-1.04
07-2.522-4.1891.353-3.337
08-2.2181.256-3.459-1.052
09-3.598-2.38-3.9511.351
10-2.8841.298-2.814-1.501
111.152-2.96-1.772-0.488
12-2.574-4.5021.355-3.337
13-2.4251.283-2.687-1.448
140.075-1.259-1.9850.916
15-0.405-2.4721.119-1.681
16-0.974-2.2961.19-1.448
17-0.556-1.3491.036-1.052
18-0.556-0.007-0.9420.715
19-0.646-1.5571.055-0.931
20-0.661-1.2591.104-1.703
21-1.927-0.564-0.8521.05
22-2.884-0.963-1.7481.22
23-1.8210.933-1.3180.029
Standard thresholds
P-value Threshold
0.001 -0.98359
0.0005 0.45946
0.0001 3.54196