MotifZN329.H12INVIVO.1.P.C
Gene (human)ZNF329
(GeneCards)
Gene synonyms (human)
Gene (mouse)Znf329
Gene synonyms (mouse)Zfp329
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
C
Motif length12
ConsensusSCTGGATCMARC
GC content60.14%
Information content (bits; total / per base)14.651 / 1.221
Data sourcesChIP-Seq
Aligned words896

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.803 0.837 0.806 0.839 0.77 0.813 4.498 4.804 412.745 442.319
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.148
HGNCHGNC:14209
MGIMGI:1921283
EntrezGene (human)GeneID:79673
(SSTAR profile)
EntrezGene (mouse)GeneID:67230
(SSTAR profile)
UniProt ID (human)ZN329_HUMAN
UniProt ID (mouse)ZN329_MOUSE
UniProt AC (human)Q86UD4
(TFClass)
UniProt AC (mouse)Q6GQR8
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0136.0684.0115.061.0
0225.0863.02.06.0
037.085.06.0798.0
0477.04.0698.0117.0
0521.017.0839.019.0
06834.011.016.035.0
0738.019.074.0765.0
0841.0766.040.049.0
09279.0536.024.057.0
10746.057.049.044.0
11167.059.0635.035.0
1213.0857.010.016.0
PFM
ACGT
010.040.7630.1280.068
020.0280.9630.0020.007
030.0080.0950.0070.891
040.0860.0040.7790.131
050.0230.0190.9360.021
060.9310.0120.0180.039
070.0420.0210.0830.854
080.0460.8550.0450.055
090.3110.5980.0270.064
100.8330.0640.0550.049
110.1860.0660.7090.039
120.0150.9560.0110.018
PWM
ACGT
01-1.791.111-0.66-1.281
02-2.1351.343-4.111-3.378
03-3.256-0.957-3.3781.265
04-1.054-3.6791.131-0.643
05-2.297-2.4911.315-2.389
061.309-2.878-2.546-1.816
07-1.738-2.389-1.0921.223
08-1.6651.224-1.689-1.493
090.2180.868-2.173-1.347
101.198-1.347-1.493-1.597
11-0.291-1.3131.037-1.816
12-2.7311.336-2.96-2.546
Standard thresholds
P-value Threshold
0.001 3.289415
0.0005 4.374225
0.0001 6.665095