| Motif | ZN320.H12RSNP.1.P.D |
| Gene (human) | ZNF320 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | ZN320.H12RSNP.1.P.D |
| Gene (human) | ZNF320 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 11 |
| Consensus | hRGGGGCMWRY |
| GC content | 65.69% |
| Information content (bits; total / per base) | 10.442 / 0.949 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (9) | 0.843 | 0.86 | 0.736 | 0.759 | 0.733 | 0.744 | 2.188 | 2.225 | 345.215 | 384.796 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.136 |
| HGNC | HGNC:13842 |
| MGI | |
| EntrezGene (human) | GeneID:162967 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN320_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | A2RRD8 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN320.H12RSNP.1.P.D.pcm |
| PWM | ZN320.H12RSNP.1.P.D.pwm |
| PFM | ZN320.H12RSNP.1.P.D.pfm |
| Alignment | ZN320.H12RSNP.1.P.D.words.tsv |
| Threshold to P-value map | ZN320.H12RSNP.1.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN320.H12RSNP.1.P.D_jaspar_format.txt |
| MEME format | ZN320.H12RSNP.1.P.D_meme_format.meme |
| Transfac format | ZN320.H12RSNP.1.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 447.0 | 257.0 | 136.0 | 160.0 |
| 02 | 233.0 | 29.0 | 592.0 | 146.0 |
| 03 | 63.0 | 3.0 | 809.0 | 125.0 |
| 04 | 27.0 | 0.0 | 971.0 | 2.0 |
| 05 | 23.0 | 1.0 | 976.0 | 0.0 |
| 06 | 34.0 | 30.0 | 908.0 | 28.0 |
| 07 | 273.0 | 712.0 | 5.0 | 10.0 |
| 08 | 153.0 | 768.0 | 15.0 | 64.0 |
| 09 | 563.0 | 5.0 | 71.0 | 361.0 |
| 10 | 315.0 | 14.0 | 542.0 | 129.0 |
| 11 | 51.0 | 237.0 | 145.0 | 567.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.447 | 0.257 | 0.136 | 0.16 |
| 02 | 0.233 | 0.029 | 0.592 | 0.146 |
| 03 | 0.063 | 0.003 | 0.809 | 0.125 |
| 04 | 0.027 | 0.0 | 0.971 | 0.002 |
| 05 | 0.023 | 0.001 | 0.976 | 0.0 |
| 06 | 0.034 | 0.03 | 0.908 | 0.028 |
| 07 | 0.273 | 0.712 | 0.005 | 0.01 |
| 08 | 0.153 | 0.768 | 0.015 | 0.064 |
| 09 | 0.563 | 0.005 | 0.071 | 0.361 |
| 10 | 0.315 | 0.014 | 0.542 | 0.129 |
| 11 | 0.051 | 0.237 | 0.145 | 0.567 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.578 | 0.027 | -0.603 | -0.442 |
| 02 | -0.07 | -2.103 | 0.858 | -0.533 |
| 03 | -1.358 | -3.975 | 1.17 | -0.686 |
| 04 | -2.171 | -4.982 | 1.352 | -4.213 |
| 05 | -2.32 | -4.525 | 1.357 | -4.982 |
| 06 | -1.952 | -2.071 | 1.285 | -2.136 |
| 07 | 0.087 | 1.042 | -3.622 | -3.066 |
| 08 | -0.487 | 1.118 | -2.711 | -1.343 |
| 09 | 0.808 | -3.622 | -1.242 | 0.365 |
| 10 | 0.23 | -2.773 | 0.77 | -0.655 |
| 11 | -1.563 | -0.053 | -0.54 | 0.815 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.676195 |
| 0.0005 | 5.576215 |
| 0.0001 | 7.36006 |