MotifZN320.H12INVIVO.0.P.B
Gene (human)ZNF320
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length23
ConsensusvdKKdGGdbMhRGGGGCMddYKh
GC content66.76%
Information content (bits; total / per base)18.644 / 0.811
Data sourcesChIP-Seq
Aligned words953

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.949 0.97 0.935 0.948 0.934 0.969 7.098 7.364 615.921 691.745
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.136
HGNCHGNC:13842
MGI
EntrezGene (human)GeneID:162967
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN320_HUMAN
UniProt ID (mouse)
UniProt AC (human)A2RRD8
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01454.0117.0291.091.0
02421.067.0279.0186.0
0355.053.0758.087.0
0441.039.0419.0454.0
0594.037.0728.094.0
0615.08.0910.020.0
0713.016.0914.010.0
08349.032.0322.0250.0
09110.0571.0115.0157.0
1096.0739.046.072.0
11455.0311.050.0137.0
12236.023.0602.092.0
1364.06.0753.0130.0
1421.00.0925.07.0
1529.01.0923.00.0
1637.014.0883.019.0
17242.0698.09.04.0
18247.0584.033.089.0
19436.048.0150.0319.0
20341.061.0418.0133.0
2174.0221.088.0570.0
2279.069.0724.081.0
23222.0449.0129.0153.0
PFM
ACGT
010.4760.1230.3050.095
020.4420.070.2930.195
030.0580.0560.7950.091
040.0430.0410.440.476
050.0990.0390.7640.099
060.0160.0080.9550.021
070.0140.0170.9590.01
080.3660.0340.3380.262
090.1150.5990.1210.165
100.1010.7750.0480.076
110.4770.3260.0520.144
120.2480.0240.6320.097
130.0670.0060.790.136
140.0220.00.9710.007
150.030.0010.9690.0
160.0390.0150.9270.02
170.2540.7320.0090.004
180.2590.6130.0350.093
190.4580.050.1570.335
200.3580.0640.4390.14
210.0780.2320.0920.598
220.0830.0720.760.085
230.2330.4710.1350.161
PWM
ACGT
010.641-0.7040.199-0.951
020.566-1.2510.157-0.246
03-1.442-1.4781.152-0.995
04-1.726-1.7740.5610.641
05-0.919-1.8241.112-0.919
06-2.664-3.2071.335-2.402
07-2.792-2.6061.339-3.02
080.379-1.9630.2990.048
09-0.7650.87-0.721-0.413
10-0.8981.127-1.615-1.18
110.6440.265-1.535-0.548
12-0.009-2.2730.923-0.94
13-1.295-3.4371.146-0.6
14-2.357-4.9411.351-3.315
15-2.056-4.4821.349-4.941
16-1.824-2.7261.305-2.45
170.0161.07-3.109-3.737
180.0360.892-1.933-0.973
190.601-1.574-0.4580.29
200.356-1.3420.559-0.577
21-1.154-0.075-0.9840.868
22-1.09-1.2221.107-1.065
23-0.070.63-0.607-0.439
Standard thresholds
P-value Threshold
0.001 1.65736
0.0005 2.92186
0.0001 5.59366