MotifZN317.H12INVIVO.1.P.B
Gene (human)ZNF317
(GeneCards)
Gene synonyms (human)KIAA1588
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
B
Motif length23
ConsensusRTRvRRRhYARRRRRMARTGGRR
GC content45.78%
Information content (bits; total / per base)17.973 / 0.781
Data sourcesChIP-Seq
Aligned words998

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.834 0.863 0.825 0.854 0.879 0.902 7.734 8.218 326.167 379.215
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.150
HGNCHGNC:13507
MGI
EntrezGene (human)GeneID:57693
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN317_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q96PQ6
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01772.076.088.062.0
0294.051.042.0811.0
03107.030.0788.073.0
04180.0224.0521.073.0
05761.068.0109.060.0
06572.027.0306.093.0
07157.045.0708.088.0
08114.0579.0100.0205.0
09129.0630.091.0148.0
10815.037.099.047.0
11180.047.0731.040.0
12730.078.0161.029.0
13768.020.0137.073.0
14185.019.0760.034.0
15611.060.0293.034.0
16196.0659.059.084.0
17830.035.091.042.0
18477.026.0381.0114.0
1960.030.092.0816.0
20117.011.0827.043.0
21140.033.0799.026.0
22615.086.0244.053.0
23685.049.0161.0103.0
PFM
ACGT
010.7740.0760.0880.062
020.0940.0510.0420.813
030.1070.030.790.073
040.180.2240.5220.073
050.7630.0680.1090.06
060.5730.0270.3070.093
070.1570.0450.7090.088
080.1140.580.10.205
090.1290.6310.0910.148
100.8170.0370.0990.047
110.180.0470.7320.04
120.7310.0780.1610.029
130.770.020.1370.073
140.1850.0190.7620.034
150.6120.060.2940.034
160.1960.660.0590.084
170.8320.0350.0910.042
180.4780.0260.3820.114
190.060.030.0920.818
200.1170.0110.8290.043
210.140.0330.8010.026
220.6160.0860.2440.053
230.6860.0490.1610.103
PWM
ACGT
011.125-1.173-1.03-1.372
02-0.965-1.561-1.7481.174
03-0.838-2.0691.145-1.213
04-0.324-0.1070.733-1.213
051.111-1.282-0.819-1.404
060.826-2.1690.203-0.975
07-0.459-1.6821.039-1.03
08-0.7750.838-0.904-0.195
09-0.6530.922-0.997-0.518
101.179-1.87-0.914-1.64
11-0.324-1.641.07-1.795
121.069-1.148-0.434-2.101
131.12-2.448-0.594-1.213
14-0.297-2.4951.109-1.95
150.892-1.4040.16-1.95
16-0.2390.967-1.42-1.075
171.197-1.923-0.997-1.748
180.645-2.2040.421-0.775
19-1.404-2.069-0.9861.18
20-0.75-2.9831.194-1.726
21-0.572-1.9791.159-2.204
220.898-1.052-0.022-1.524
231.006-1.6-0.434-0.875
Standard thresholds
P-value Threshold
0.001 2.56696
0.0005 3.65671
0.0001 5.99181